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Report for CCDS22897.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22897.1 Public Mus musculus 9 Keap1 23 108 98 CCDS HistoryNCBI Gene:50868Re-query CCDS DB by CCDS ID:22897.1Re-query CCDS DB by GeneID:50868See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22897.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049567.9 ENSMUSP00000062467.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049567.9Link to Ensembl Protein Viewer:ENSMUSP00000062467.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000049567Re-query CCDS DB by Protein ID:ENSMUSP00000062467
Original member Current member EBI ENSMUST00000164812.7 ENSMUSP00000131029.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164812.7Link to Ensembl Protein Viewer:ENSMUSP00000131029.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164812Re-query CCDS DB by Protein ID:ENSMUSP00000131029
Original member Current member EBI ENSMUST00000194542.5 ENSMUSP00000141807.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000194542.5Link to Ensembl Protein Viewer:ENSMUSP00000141807.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000194542Re-query CCDS DB by Protein ID:ENSMUSP00000141807
Original member Current member EBI ENSMUST00000193982.1 ENSMUSP00000141840.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000193982.1Link to Ensembl Protein Viewer:ENSMUSP00000141840.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000193982Re-query CCDS DB by Protein ID:ENSMUSP00000141840
Original member Current member NCBI NM_001110305.1 NP_001103775.1 Accepted alive Link to Nucleotide Sequence:NM_001110305.1Link to Protein Sequence:NP_001103775.1Re-query CCDS DB by Nucleotide ID:NM_001110305Re-query CCDS DB by Protein ID:NP_001103775Link to BLAST:NP_001103775.1
Original member Current member NCBI NM_001110306.1 NP_001103776.1 Accepted alive Link to Nucleotide Sequence:NM_001110306.1Link to Protein Sequence:NP_001103776.1Re-query CCDS DB by Nucleotide ID:NM_001110306Re-query CCDS DB by Protein ID:NP_001103776Link to BLAST:NP_001103776.1
Original member Current member NCBI NM_001110307.1 NP_001103777.1 Accepted alive Link to Nucleotide Sequence:NM_001110307.1Link to Protein Sequence:NP_001103777.1Re-query CCDS DB by Nucleotide ID:NM_001110307Re-query CCDS DB by Protein ID:NP_001103777Link to BLAST:NP_001103777.1
Original member Current member NCBI NM_016679.4 NP_057888.1 Accepted alive Link to Nucleotide Sequence:NM_016679.4Link to Protein Sequence:NP_057888.1Re-query CCDS DB by Nucleotide ID:NM_016679Re-query CCDS DB by Protein ID:NP_057888Link to BLAST:NP_057888.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001103775.1 624 Q9Z2X8 624 100% 0 0
NP_001103776.1 624 Q9Z2X8 624 100% 0 0
NP_001103777.1 624 Q9Z2X8 624 100% 0 0
NP_057888.1 624 Q9Z2X8 624 100% 0 0

Chromosomal Locations for CCDS 22897.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21230702 21230868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21231250 21231426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21231697 21231902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21233388 21234073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21237071 21237709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1875 nt):
ATGCAGCCCGAACCCAAGCTTAGCGGGGCTCCCCGCAGCAGCCAGTTCCTGCCCCTGTGGTCAAAGTGCC
CCGAGGGGGCCGGGGACGCAGTGATGTATGCCTCCACGGAGTGCAAGGCAGAGGTGACGCCCTCGCAGGA
CGGTAACCGAACCTTCAGCTACACACTAGAGGATCACACCAAGCAGGCTTTTGGCGTCATGAACGAGCTT
CGCCTGAGCCAGCAACTCTGTGACGTGACCCTGCAGGTCAAATATGAGGACATCCCAGCTGCCCAATTCA
TGGCTCACAAAGTGGTGCTGGCCTCCTCCAGCCCAGTCTTTAAAGCCATGTTCACCAACGGGCTTCGGGA
GCAGGGCATGGAGGTGGTGTCCATCGAAGGCATCCACCCTAAGGTCATGGAAAGGCTTATTGAGTTCGCC
TACACGGCCTCCATCTCCGTGGGCGAGAAGTGTGTCCTGCACGTGATGAACGGGGCGGTCATGTACCAGA
TTGACAGCGTGGTTCGAGCCTGCAGCGACTTCCTCGTGCAGCAGCTGGACCCCAGCAACGCCATTGGCAT
CGCCAACTTCGCGGAGCAGATCGGCTGCACTGAACTGCACCAGCGTGCCCGGGAGTATATCTACATGCAC
TTCGGGGAGGTGGCCAAGCAGGAGGAGTTCTTCAACCTGTCACACTGCCAGCTGGCCACGCTCATCAGCC
GGGATGATCTGAACGTACGCTGCGAGTCCGAGGTGTTCCACGCGTGCATCGACTGGGTCAAATACGACTG
CCCGCAGCGGCGCTTCTACGTGCAGGCACTGCTGCGGGCCGTGCGCTGCCATGCGCTCACGCCGCGCTTC
CTGCAGACGCAGCTGCAGAAGTGTGAGATCCTGCAGGCCGACGCGCGCTGCAAGGACTACCTGGTGCAGA
TATTCCAGGAGCTCACGCTGCACAAGCCCACGCAGGCAGTGCCCTGCCGCGCGCCCAAAGTGGGCCGCCT
CATCTACACAGCGGGCGGTTACTTCCGACAGTCGCTCAGCTACCTGGAGGCCTACAACCCGAGCAATGGC
TCCTGGCTGCGCCTGGCCGATCTACAGGTGCCGCGCAGTGGGCTGGCAGGCTGCGTGGTGGGTGGGCTGC
TATACGCTGTGGGCGGCCGCAACAACTCTCCGGATGGCAACACTGACTCCAGCGCCCTGGACTGCTACAA
CCCCATGACCAACCAGTGGTCGCCCTGTGCCTCTATGAGCGTGCCACGCAACCGCATCGGGGTGGGGGTC
ATAGATGGCCACATCTACGCAGTCGGGGGTTCCCACGGCTGCATCCACCACAGCAGCGTGGAGAGATATG
AGCCAGAGCGGGACGAGTGGCATCTAGTCGCGCCAATGTTGACACGGAGGATTGGCGTGGGCGTGGCAGT
GCTCAACCGCTTGCTGTATGCAGTGGGGGGCTTTGACGGGACTAACCGGCTTAACTCCGCAGAATGTTAC
TATCCAGAGAGGAATGAGTGGCGGATGATCACACCGATGAATACCATCCGGAGCGGGGCCGGGGTCTGCG
TGCTGCACAACTGTATCTATGCAGCAGGGGGCTACGATGGGCAGGACCAGTTGAACAGTGTGGAGCGCTA
CGACGTGGAGACAGAGACCTGGACTTTCGTAGCCCCCATGAGGCATCACCGTAGTGCGCTGGGGATTACT
GTGCACCAGGGCAAGATCTACGTCCTCGGAGGCTATGATGGCCACACTTTTCTGGACAGTGTGGAATGCT
ATGACCCGGACAGTGATACCTGGAGTGAGGTGACCCGCATGACATCTGGCCGCAGCGGGGTGGGTGTGGC
CGTCACCATGGAACCCTGTCGGAAGCAAATTGATCAACAAAACTGTACCTGCTGA

Translation (624 aa):
MQPEPKLSGAPRSSQFLPLWSKCPEGAGDAVMYASTECKAEVTPSQDGNRTFSYTLEDHTKQAFGVMNEL
RLSQQLCDVTLQVKYEDIPAAQFMAHKVVLASSSPVFKAMFTNGLREQGMEVVSIEGIHPKVMERLIEFA
YTASISVGEKCVLHVMNGAVMYQIDSVVRACSDFLVQQLDPSNAIGIANFAEQIGCTELHQRAREYIYMH
FGEVAKQEEFFNLSHCQLATLISRDDLNVRCESEVFHACIDWVKYDCPQRRFYVQALLRAVRCHALTPRF
LQTQLQKCEILQADARCKDYLVQIFQELTLHKPTQAVPCRAPKVGRLIYTAGGYFRQSLSYLEAYNPSNG
SWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCASMSVPRNRIGVGV
IDGHIYAVGGSHGCIHHSSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY
YPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMRHHRSALGIT
VHQGKIYVLGGYDGHTFLDSVECYDPDSDTWSEVTRMTSGRSGVGVAVTMEPCRKQIDQQNCTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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