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Report for CCDS40796.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40796.2 Reviewed, update pending Mus musculus 9 Osbpl10 23 108 98 CCDS HistoryNCBI Gene:74486Re-query CCDS DB by CCDS ID:40796.2Re-query CCDS DB by GeneID:74486See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 40796.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000183104.7 ENSMUSP00000138287.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183104.7Link to Ensembl Protein Viewer:ENSMUSP00000138287.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183104Re-query CCDS DB by Protein ID:ENSMUSP00000138287
Original member Current member NCBI NM_148958.3 NP_683761.2 Pending alive Link to Nucleotide Sequence:NM_148958.3Link to Protein Sequence:NP_683761.2Re-query CCDS DB by Nucleotide ID:NM_148958Re-query CCDS DB by Protein ID:NP_683761Link to BLAST:NP_683761.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_683761.2 766 S4R1M9 766 100% 0 0

Chromosomal Locations for CCDS 40796.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 114978678 114978964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115061833 115062008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115067246 115067325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115109400 115109591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115167082 115167292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115175928 115176082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115207514 115207663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115216549 115217029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115223593 115223779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115226681 115226863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115229860 115230013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 115232112 115232156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2301 nt):
ATGGAGAGGGCGGCCCAGAGCACAGACGGCGGCGGTGGCGGGGGCAGCAATAGCAGCAGCCGGAGCAGCA
GCCGCGCCACTTCGGCGGGCTCCTCGCCCTCCTGCTCCCTGGCTGGCCGAGGGGTGGCCAGCCGCTCTGG
GGCCGCGGGACTGGGCGGCGGGGGCAGCCGCAGCAGTCCCGGCTCGGTGGCGGCTAGCCCGTCCGGAGGA
GGCGGCCGAAGGAGGGAGCCGGCGCTCGAGGGCGTGCTCAGCAAATACACCAACCTCCTCCAGGGCTGGC
AAAGCAGGTACTTTGTGCTGGATTTTGAGGCTGGCCTCCTGCAGTATTTTGTGAATGAGCAGAGCAAGCA
CCAGAAGCCCCGGGGAGTCCTGTCTTTGTCTGGAGCCATCGTGTCCCTGAGCGACGAAGCTCCCCACATG
CTGGTGGTGTACTCTGCCAACGGAGAGATGTACAAGCTGAGAGCCGCTGACTCGAAGGAGAAGCAGTTGT
GGGTGACTCAGCTTCGAGCGTGCGCCAAATACCACATGGAGATGAGTTCCAAGACTACTCCAGGCTCCCG
CAGCCGAAGCCTCACTTTGCTCCCCCATGGAACACCCAGTTCTGCATCTCCCTGTAGCCAGAGACATCTC
AGTACGGGCGCCCCCGGTGTTGTCTCAGTCACGCGTCACAAGTCGCCTGCAGCTGCCCGAAGAGCCAAGA
GTCAGTATTCCGGCCAGCTTCACGAAGTCAGAGAGATGATGAACCAGGTGGAAGGCCAGCAGAAGAACCT
CGTGCATGCCATTGAGTCCCTGCCAGGCTCGGGCCCTCTCACTGCCTTGGACCAGGACCTGCTTCTCCTG
AAGGCTACCTCTGCCGCCACCCTCAGCTGTCTTGGGGAGTGCCTCAGCCTGCTCCAGCAGAGTGTGCGCC
AGGCGGCGCCACCCAGCCACAAGCCAGGCGCCTCAGAGACCATCCTGGGATGGCATGGGCCCACGTCACA
TTCCACAGACCAACTGAAAAATGGGACCCTCGGCTCTCTACCCTCCGCCAGTGCCAACATAACATGGGCG
ATTCTACCAAACTCTGCAGAAGAGGAACACAACTCACAGCCGGAGCCAGAGCCAGACTCAGGCCCTGAAC
TGGTTTTGTCCGAAGAAGAACAGAGCGACAATGAGGACAAGGGAGAGGTGGAGCCGGGCGCCATGGAGGA
TCAGCGTAGTGTGATCCTCCACCTCATCTCACAGCTCAAGCTGGGCATGGACCTGACCAAGGTGGTGCTC
CCCACGTTCATTCTGGAGAAGCGGTCCTTGCTGGAGATGTACGCAGACTTTATGGCGCACCCTGACCTGC
TGCTGGCCATCACTGCCGGGGCGACGCCAGAGGAGAGAGTCATTAGCTTCGTGGAGTATTATCTTACGGC
CTTCCACGAGGGCCGCAAAGGCACCCTGGCCAAGAAGCCCTACAACCCCATCATCGGCGAGACCTTTCAC
TGCTCCTGGGAGGTTCCTAAGGACAGAGTCAAGTCGAAGTGGACTTCCCCCCACCCTCCCATTAGTGCTC
ACGAGCATCCGATGGCCGATGACCCTTCTAAAAGCTATAAGCTCAGGTTTGTGGCTGAGCAGGTATCCCA
TCATCCGCCCATCTCCTGCTTCTACTGTGAGTGCAAGGAGAAGAGACTGTGTGTCAACACTCACGTATGG
ACCAAAAGCAAGTTCATGGGCATGTCCGTGGGGGTCTCTATGATAGGGGAAGGTGTGCTTCGACTTCTGG
ACCACGGGGAAGAGTACGTCTTCACGCTGCCCAGTGCCTACGCCCGCTCCATCCTCACCGTGCCGTGGGT
GGAGCTTGGAGGGAAGGTCAACATCAGCTGTGCCAAGACTGGGTACTCTGCCACCGTGACGTTCCACACG
AAGCCCTTCTACGGCGGGAAAGTCCACAGGGTCACAGCTGAAGTGAAACACAACCCAACCAACACCATCG
TCTGTAAAGCACATGGGGAGTGGAATGGCACCTTGGAGTTCACCTACAGCAACGGGGAGACCAAAGTCAT
CGACACAACCACCCTGCCTGTGTATCCTAAGAAGCTTAGACCCCTGGAGAAGCAGGGGCCCATGGAGTCC
AGGAACCTCTGGCAGGAAGTCACCCACTACCTGAGGCTTGGGGACATTGACGCAGCCACAGAGCAGAAAC
GACGCCTGGAGGAGAGGCAGAGGGTGGAGGAGAGGAAACGGGAGACCCTTCGCACACCGTGGCGACCCAA
GTATTTCATCCCGGAGGGCGATGGCTGGGTGTACTTCAACCCCCTCTGGAAGACACACTGA

Translation (766 aa):
MERAAQSTDGGGGGGSNSSSRSSSRATSAGSSPSCSLAGRGVASRSGAAGLGGGGSRSSPGSVAASPSGG
GGRRREPALEGVLSKYTNLLQGWQSRYFVLDFEAGLLQYFVNEQSKHQKPRGVLSLSGAIVSLSDEAPHM
LVVYSANGEMYKLRAADSKEKQLWVTQLRACAKYHMEMSSKTTPGSRSRSLTLLPHGTPSSASPCSQRHL
STGAPGVVSVTRHKSPAAARRAKSQYSGQLHEVREMMNQVEGQQKNLVHAIESLPGSGPLTALDQDLLLL
KATSAATLSCLGECLSLLQQSVRQAAPPSHKPGASETILGWHGPTSHSTDQLKNGTLGSLPSASANITWA
ILPNSAEEEHNSQPEPEPDSGPELVLSEEEQSDNEDKGEVEPGAMEDQRSVILHLISQLKLGMDLTKVVL
PTFILEKRSLLEMYADFMAHPDLLLAITAGATPEERVISFVEYYLTAFHEGRKGTLAKKPYNPIIGETFH
CSWEVPKDRVKSKWTSPHPPISAHEHPMADDPSKSYKLRFVAEQVSHHPPISCFYCECKEKRLCVNTHVW
TKSKFMGMSVGVSMIGEGVLRLLDHGEEYVFTLPSAYARSILTVPWVELGGKVNISCAKTGYSATVTFHT
KPFYGGKVHRVTAEVKHNPTNTIVCKAHGEWNGTLEFTYSNGETKVIDTTTLPVYPKKLRPLEKQGPMES
RNLWQEVTHYLRLGDIDAATEQKRRLEERQRVEERKRETLRTPWRPKYFIPEGDGWVYFNPLWKTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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