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Report for CCDS43605.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43605.1 Public Homo sapiens 7 DTX2 24 110 108 CCDS HistoryNCBI Gene:113878Re-query CCDS DB by CCDS ID:43605.1Re-query CCDS DB by GeneID:113878See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43605.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446820.6 ENSP00000392545.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446820.6Link to Ensembl Protein Viewer:ENSP00000392545.2Re-query CCDS DB by Nucleotide ID:ENST00000446820Re-query CCDS DB by Protein ID:ENSP00000392545
Original member Current member NCBI NM_001102596.2 NP_001096066.1 Accepted alive Link to Nucleotide Sequence:NM_001102596.2Link to Protein Sequence:NP_001096066.1Re-query CCDS DB by Nucleotide ID:NM_001102596Re-query CCDS DB by Protein ID:NP_001096066Link to BLAST:NP_001096066.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096066.1 575 Q86UW9-2 575 100% 0 0

Chromosomal Locations for CCDS 43605.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 76480510 76480777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76482508 76483147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76492153 76492253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76500441 76500520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76502298 76502456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76503426 76503587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76504356 76504445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 76505374 76505601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGGCCATGGCCCCAAGCCCTTCCCTGGTGCAGGTGTACACCAGCCCCGCGGCTGTGGCCGTGTGGGAAT
GGCAGGACGGGCTGGGCACCTGGCACCCCTACAGTGCCACCGTCTGCAGCTTCATCGAGCAGCAGTTTGT
CCAGCAGAAGGGCCAACGTTTTGGGCTTGGGAGCCTGGCCCACAGCATCCCCTTGGGCCAGGCAGACCCC
TCGCTGGCCCCTTACATTATTGACCTCCCCAGCTGGACCCAGTTCCGCCAGGACACCGGCACCATGCGGG
CTGTGCGGAGACACCTGTTCCCCCAGCACTCAGCCCCTGGCCGAGGTGTCGTCTGGGAGTGGCTGAGCGA
CGATGGCTCCTGGACTGCCTATGAAGCCAGCGTCTGTGACTATCTGGAGCAGCAGGTGGCCAGGGGCAAC
CAGCTCGTGGACTTGGCCCCCCTGGGGTACAACTACACTGTCAACTACACCACCCACACGCAGACCAACA
AGACTTCCAGCTTCTGCCGCAGCGTGCGGCGCCAAGCAGGGCCGCCTTACCCGGTGACCACCATCATCGC
TCCGCCGGGCCACACAGGCGTCGCCTGCTCTTGCCACCAGTGCCTCAGTGGCAGCAGAACTGGCCCCGTG
TCAGGCCGCTACCGCCACTCCATGACCAACCTCCCTGCATACCCCGTCCCCCAGCACCCCCCACACAGGA
CCGCTTCTGTGTTTGGGACCCACCAGGCCTTTGCACCGTACAACAAACCCTCACTCTCCGGGGCCCGGTC
TGCGCCCAGGCTGAACACCACCAACGCCTGGGGCGCAGCTCCTCCTTCCCTGGGGAGCCAGCCCCTCTAC
CGCTCCAGCCTCTCCCACCTGGGACCGCAGCACCTGCCCCCAGGATCCTCCACCTCCGGTGCAGTCAGTG
CCTCCCTCCCCAGCGGTCCCTCAAGCAGCCCAGGGAGCGTCCCTGCCACTGTGCCCATGCAGATGCCAAA
GCCCAGCAGAGTCCAGCAGGCGCTCGCAGGAGCGACCCCGAAGCCAGAGCCAGAGCCAGAGCAGGTCATA
AAAAACTACACGGAAGAGCTGAAAGTGCCCCCAGATGAGGACTGCATCATCTGCATGGAGAAGCTGTCCA
CAGCGTCTGGATACAGCGATGTGACTGACAGCAAGGCAATCGGGTCCCTAGCTGTGGGCCACCTCACCAA
GTGCAGCCATGCCTTCCACCTGCTGTGCCTCCTGGCCATGTACTGCAACGGCAATAAGGATGGAAGTCTG
CAGTGTCCCTCCTGCAAAACCATCTATGGAGAGAAGACGGGGACCCAGCCCCAGGGAAAGATGGAGGTAT
TACGGTTCCAGATGTCGCTCCCCGGCCACGAGGACTGCGGGACCATCCTCATAGTTTACAGCATTCCCCA
TGGTATCCAGGGCCCTGAGCACCCCAATCCCGGAAAGCCGTTCACTGCCAGAGGGTTTCCCCGCCAGTGC
TACCTTCCAGACAACGCCCAGGGCCGCAAGGTCCTAGAGCTCCTGAAGGTGGCCTGGAAGAGGCGGCTCA
TCTTCACAGTGGGCACGTCCAGCACCACGGGTGAGACGGACACCGTGGTATGGAACGAGATCCACCACAA
GACAGAGATGGACCGCAACATTACGGGCCACGGCTATCCCGACCCCAACTACCTGCAGAACGTGCTGGCT
GAGCTGGCTGCCCAGGGGGTGACCGAGGACTGCCTGGAGCAGCAGTGA

Translation (575 aa):
MAMAPSPSLVQVYTSPAAVAVWEWQDGLGTWHPYSATVCSFIEQQFVQQKGQRFGLGSLAHSIPLGQADP
SLAPYIIDLPSWTQFRQDTGTMRAVRRHLFPQHSAPGRGVVWEWLSDDGSWTAYEASVCDYLEQQVARGN
QLVDLAPLGYNYTVNYTTHTQTNKTSSFCRSVRRQAGPPYPVTTIIAPPGHTGVACSCHQCLSGSRTGPV
SGRYRHSMTNLPAYPVPQHPPHRTASVFGTHQAFAPYNKPSLSGARSAPRLNTTNAWGAAPPSLGSQPLY
RSSLSHLGPQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQMPKPSRVQQALAGATPKPEPEPEQVI
KNYTEELKVPPDEDCIICMEKLSTASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAMYCNGNKDGSL
QCPSCKTIYGEKTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYSIPHGIQGPEHPNPGKPFTARGFPRQC
YLPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDRNITGHGYPDPNYLQNVLA
ELAAQGVTEDCLEQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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