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Report for CCDS29129.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29129.1 Public Mus musculus 18 Wnt8a 23 108 98 CCDS HistoryNCBI Gene:20890Re-query CCDS DB by CCDS ID:29129.1Re-query CCDS DB by GeneID:20890See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29129.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000012426.2 ENSMUSP00000012426.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000012426.2Link to Ensembl Protein Viewer:ENSMUSP00000012426.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000012426Re-query CCDS DB by Protein ID:ENSMUSP00000012426
Original member Current member NCBI NM_009290.3 NP_033316.2 Accepted alive Link to Nucleotide Sequence:NM_009290.3Link to Protein Sequence:NP_033316.2Re-query CCDS DB by Nucleotide ID:NM_009290Re-query CCDS DB by Protein ID:NP_033316Link to BLAST:NP_033316.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033316.2 354 Q64527 354 100% 0 0

Chromosomal Locations for CCDS 29129.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 34542369 34542436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 34542522 34542555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 34542844 34542982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 34544782 34544907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 34545502 34545644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 34547094 34547648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGGACACTTGTTAATGCTGTGGGTGGCTGCGGGCATGTGCTATCCAGCCCTGGGTGCTTCTGCCTGGT
CAGTGAACAACTTCCTGATAACCCGTCCCAAGGCCTATCTGACCTACACCGCCAGTGTGGCCTTGGGAGC
TCAGATTGGCATCGAAGAGTGTAAGTTCCAGTTTGCCTGGGAACGGTGGAATTGTCCTGAGCATGCTTTT
CAGTTTTCAACCCACAACAGGCTGCGAGCTGCCACGAGAGAGACATCCTTCATTCATGCCATCCGCTCTG
CTGCCATCATGTACGCAGTCACCAAGAACTGCAGCATGGGTGACTTGGAAAACTGCGGCTGTGACGAGTC
ACAAAATGGAAAAACAGGTGGCCATGGCTGGATCTGGGGAGGCTGCAGCGACAACGTGGAGTTCGGGGAA
AAAATCTCCAGACTCTTCGTGGACAGTTTGGAGAAAGGGAAGGATGCCAGAGCCCTGGTGAACCTTCACA
ACAACAGGGCCGGCAGACTGGCAGTGAGGGCCTCCACGAAAAGGACCTGCAAGTGTCATGGCATCTCAGG
AAGCTGCAGCATCCAGACGTGTTGGCTGCAGCTGGCTGACTTCCGGCAGATGGGAAATTACCTAAAGGCC
AAGTATGACCGCGCGCTGAAAATTGAGATGGACAAGCGCCAGCTAAGGGCTGGCAACAGAGCCGAGGGCC
GCTGGGCTCTCACGGAGGCCTTCCTTCCCAGCACAGAGGCTGAGCTGATCTTCTTAGAGGGGTCTCCTGA
CTACTGCAACCGCAACGCCAGCCTGAGCATCCAGGGCACAGAGGGGAGGGAGTGCCTGCAGAATGCCCGC
AGTGCTTCCCGGCGGGAGCAGCGCAGCTGTGGGCGCCTGTGCACGGAGTGCGGGCTGCAGGTGGAGGAGA
GGAGAGCAGAGGCCGTGAGCAGCTGTGACTGCAACTTTCAGTGGTGTTGCACTGTCAAGTGTGGCCAGTG
CAGGCGTGTGGTGAGCAGATACTACTGCACACGCCCTGTAGGTAGTGCCAGGCCCCGGGGCAGGGGCAAG
GACAGTGCCTGGTAA

Translation (354 aa):
MGHLLMLWVAAGMCYPALGASAWSVNNFLITRPKAYLTYTASVALGAQIGIEECKFQFAWERWNCPEHAF
QFSTHNRLRAATRETSFIHAIRSAAIMYAVTKNCSMGDLENCGCDESQNGKTGGHGWIWGGCSDNVEFGE
KISRLFVDSLEKGKDARALVNLHNNRAGRLAVRASTKRTCKCHGISGSCSIQTCWLQLADFRQMGNYLKA
KYDRALKIEMDKRQLRAGNRAEGRWALTEAFLPSTEAELIFLEGSPDYCNRNASLSIQGTEGRECLQNAR
SASRREQRSCGRLCTECGLQVEERRAEAVSSCDCNFQWCCTVKCGQCRRVVSRYYCTRPVGSARPRGRGK
DSAW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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