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Report for CCDS91406.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91406.1 Public Homo sapiens 11 TNNT3 24 110 108 CCDS HistoryNCBI Gene:7140Re-query CCDS DB by CCDS ID:91406.1Re-query CCDS DB by GeneID:7140See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91406.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641225.1 ENSP00000493372.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641225.1Link to Ensembl Protein Viewer:ENSP00000493372.1Re-query CCDS DB by Nucleotide ID:ENST00000641225Re-query CCDS DB by Protein ID:ENSP00000493372
Original member Current member NCBI NM_001367851.1 NP_001354780.1 Accepted alive Link to Nucleotide Sequence:NM_001367851.1Link to Protein Sequence:NP_001354780.1Re-query CCDS DB by Nucleotide ID:NM_001367851Re-query CCDS DB by Protein ID:NP_001354780Link to BLAST:NP_001354780.1
Original member Current member NCBI NM_001367852.1 NP_001354781.1 Accepted alive Link to Nucleotide Sequence:NM_001367852.1Link to Protein Sequence:NP_001354781.1Re-query CCDS DB by Nucleotide ID:NM_001367852Re-query CCDS DB by Protein ID:NP_001354781Link to BLAST:NP_001354781.1

Chromosomal Locations for CCDS 91406.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 1933754 1933837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1933931 1934008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934332 1934445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934546 1934655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1934829 1934919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1936963 1937003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 1938438 1938492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGGAGCTCCAGGCCCTCATCGACAGCCACTTTGAAGCCCGGAAGAAGGAGGAGGAGGAGCTGGTCGCTC
TCAAAGAGAGAATCGAGAAGCGCCGTGCAGAGAGAGCGGAGCAGCAGAGGATTCGTGCAGAGAAGGAGAG
GGAGCGCCAGAACAGACTGGCGGAGGAAAAGGCCAGAAGGGAGGAGGAGGATGCCAAGAGGAGGGCAGAG
GACGACCTGAAGAAGAAGAAAGCTCTGTCTTCCATGGGAGCCAACTACAGCAGCTACCTGGCCAAGGCTG
ACCAGAAGAGAGGCAAGAAGCAGACAGCCCGGGAAATGAAGAAGAAGATTCTGGCTGAGAGACGCAAGCC
GCTCAACATCGATCACCTTGGTGAAGACAAACTGAGGGACAAGGCCAAGGAGCTCTGGGAGACCCTGCAC
CAGCTGGAGATTGACAAGTTCGAGTTTGGGGAGAAGCTGAAACGCCAGAAATATGACATCACCACGCTCA
GGAGCCGCATTGACCAGGCCCAGAAGCACAGCAAGAAGGCTGGGACCCCAGCCAAGGGCAAAGTCGGCGG
GCGCTGGAAGTAG

Translation (190 aa):
MELQALIDSHFEARKKEEEELVALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRRAE
DDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKILAERRKPLNIDHLGEDKLRDKAKELWETLH
QLEIDKFEFGEKLKRQKYDITTLRSRIDQAQKHSKKAGTPAKGKVGGRWK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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