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Report for CCDS21676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21676.1 Public Mus musculus 7 Or2ag1 23 108 98 CCDS HistoryNCBI Gene:259034Re-query CCDS DB by CCDS ID:21676.1Re-query CCDS DB by GeneID:259034See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21676.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060879.5 ENSMUSP00000050694.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060879.5Link to Ensembl Protein Viewer:ENSMUSP00000050694.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000060879Re-query CCDS DB by Protein ID:ENSMUSP00000050694
Original member Current member EBI ENSMUST00000213721.1 ENSMUSP00000149585.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213721.1Link to Ensembl Protein Viewer:ENSMUSP00000149585.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213721Re-query CCDS DB by Protein ID:ENSMUSP00000149585
Original member Current member EBI ENSMUST00000216009.1 ENSMUSP00000150853.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216009.1Link to Ensembl Protein Viewer:ENSMUSP00000150853.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216009Re-query CCDS DB by Protein ID:ENSMUSP00000150853
Original member Current member NCBI NM_147032.2 NP_667243.2 Accepted alive Link to Nucleotide Sequence:NM_147032.2Link to Protein Sequence:NP_667243.2Re-query CCDS DB by Nucleotide ID:NM_147032Re-query CCDS DB by Protein ID:NP_667243Link to BLAST:NP_667243.2

Chromosomal Locations for CCDS 21676.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 106873293 106874243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAGCCTTGGAACTCTACCTTAGGAACTGATTTCAACTTAGTGGGGATTCTGGATGACAGTGGCTCTC
CTGAACTGCTTTGTGCCACATTCACAGCTCTGTACATGTTGGCTCTGATAAGCAATGGACTGCTGATCCT
GGTCATCACCATGGATGCCCGTCTTCATGTACCCATGTACTTCCTGCTTGGGCAGCTGTCTCTCATGGAT
CTCCTCTTCACTTCAGTTGTCACTCCCAAGGCTGTCATAGACTTTCTGCTCAGAGACAATACCATCTCAT
TTGAGGGCTGTTCCCTCCAGATGTTCCTGGCACTGACACTGGGTGGTGCAGAAGACCTCCTTCTGGCCTT
CATGGCCTATGACAGGTATGTGGCCATTTGTCACCCGCTGAACTACATGATCTTCATGAGACCAAGCATC
TGCTGGCTTATGGTGGCCACATCATGGGTCCTAGCATCTCTGATGGCCCTAGGATATACCACCTATACCA
TGCAGTATTCCTATTGCAAATCCCGGAAGATCAGACACTTGCTTTGTGAGATCCCTCCATTGCTGAAGCT
GGCCTGTGCAGACACCTCCAAGTATGAACTCATGGTTTATGTGATGGGTGTGACTTTCCTCATTCCTCCT
CTTGCTGCCATCCTGGCCTCCTACTCACTAATTTTGTTCACTGTGCTCCATATGCCCTCAAATGAGGGCA
GGAAGAAAGCCCTTGTCACATGTTCTTCACATCTGACTGTAGTTGGAATGTTCTATGGGGCTGCCACATT
CATGTATGTATTGCCCAATTCCTTTCACAGCCCTAGACAAGACAATATCATTTCTGTGTTTTACACAATA
GTTACCCCAGCCCTGAACCCACTCATCTACAGCCTGAGGAATAAAGAGGTCACTGGAGCTTTAATAAGGG
TTCTGGGAAGGTATATTGTGCCAGCACACCCTACTCTCTAG

Translation (316 aa):
MEPWNSTLGTDFNLVGILDDSGSPELLCATFTALYMLALISNGLLILVITMDARLHVPMYFLLGQLSLMD
LLFTSVVTPKAVIDFLLRDNTISFEGCSLQMFLALTLGGAEDLLLAFMAYDRYVAICHPLNYMIFMRPSI
CWLMVATSWVLASLMALGYTTYTMQYSYCKSRKIRHLLCEIPPLLKLACADTSKYELMVYVMGVTFLIPP
LAAILASYSLILFTVLHMPSNEGRKKALVTCSSHLTVVGMFYGAATFMYVLPNSFHSPRQDNIISVFYTI
VTPALNPLIYSLRNKEVTGALIRVLGRYIVPAHPTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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