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Report for CCDS8838.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8838.1 Public Homo sapiens 12 KRT76 24 110 108 CCDS HistoryNCBI Gene:51350Re-query CCDS DB by CCDS ID:8838.1Re-query CCDS DB by GeneID:51350See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8838.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000332411.2 ENSP00000330101.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000332411.2Link to Ensembl Protein Viewer:ENSP00000330101.2Re-query CCDS DB by Nucleotide ID:ENST00000332411Re-query CCDS DB by Protein ID:ENSP00000330101
Original member Current member NCBI NM_015848.4 NP_056932.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015848.4Link to Protein Sequence:NP_056932.2Re-query CCDS DB by Nucleotide ID:NM_015848Re-query CCDS DB by Protein ID:NP_056932Link to BLAST:NP_056932.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056932.2 638 Q01546 638 100% 0 0

Chromosomal Locations for CCDS 8838.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 52768713 52769110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52769549 52769583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52770999 52771219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52771871 52771996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52772094 52772258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52772783 52772878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52773582 52773642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52775388 52775602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52776692 52777291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGAACAGACAAGTTTGCAAGAAATCCTTCAGTGGCAGGAGCCAGGGTTTCTCTGGCCGCTCTGCTGTGG
TCTCCGGCAGCAGCAGGATGAGCTGTGTGGCCCGCTCTGGGGGAGCTGGTGGAGGGGCCTGTGGCTTCAG
GAGCGGAGCAGGCAGCTTTGGCAGTCGCAGCCTCTACAACCTGGGCAGCAACAAGAGCATCTCCATCAGC
GTGGCAGCTGGCAGCTCCCGGGCTGGAGGCTTTGGGGGAGGGCGGAGCAGCTGTGGCTTTGCAGGTGGCT
ATGGAGGTGGCTTTGGGGGCAGCTATGGTGGTGGCTTTGGTGGTGGCAGAGGAGTAGGTAGTGGTTTTGG
AGGGGCTGGTGGCTTTGGTGGAGCTGGTGGCTTTGGTGGTCCTGGTGTATTTGGTGGGCCTGGCAGCTTT
GGTGGTCCTGGTGGCTTTGGCCCTGGGGGCTTTCCTGGGGGAATTCAGGAAGTGATTGTAAACCAGAGTC
TCCTGCAGCCCCTCAATGTGGAGATCGACCCCCAGATTGGGCAAGTAAAGGCCCAGGAGCGGGAACAGAT
CAAGACCCTCAACAACAAGTTTGCCTCCTTCATCGACAAGGTGCGGTTCCTGGAACAGCAGAACAAGGTC
CTGGAGACCAAGTGGGAACTGCTCCAGCAGCAGACCACAGGCTCAGGGCCCAGCAGCCTGGAGCCTTGTT
TTGAATCCTACATCAGCTTCCTATGCAAGCAGCTAGATTCACTTCTAGGGGAGAGGGGGAACCTGGAGGG
AGAGCTGAAAAGCATGCAGGACCTGGTGGAAGACTTCAAAAAGAAGTATGAAGATGAAATCAACAAACGC
ACTGCCGCAGAGAATGAGTTTGTGGGGCTCAAGAAGGATGTGGATGCGGCTTTCATGAACAAGGTGGAGC
TGCAGGCCAAAGTGGACAGCCTGACAGATGAAGTCAGCTTCCTGAGGACCCTCTATGAGATGGAGCTGTC
CCAGATGCAAAGCCATGCCAGTGACACGTCTGTGGTTCTGTCCATGGACAACAACCGCTGCCTGGACCTG
GGCAGCATCATTGCCGAGGTCCGCGCCCAGTATGAGGAGATTGCCCAGAGGAGCAAGTCTGAAGCTGAGG
CCCTGTACCAGACCAAGCTTGGGGAGCTGCAGACCACAGCTGGCAGGCATGGGGATGACCTGAGGAACAC
CAAGAGTGAGATCATGGAGCTCAACAGGATGATCCAGAGGCTACGGGCTGAGATTGAAAATGTCAAGAAG
CAGAATGCCAACCTGCAGACGGCAATTGCAGAGGCTGAGCAGCGTGGAGAGATGGCCCTCAAGGACGCCA
ATGCCAAGCTCCAAGACTTGCAGACTGCCCTACAGAAGGCTAAGGATGACCTGGCTCGGCTCCTGCGTGA
CTACCAGGAGCTGATGAACGTCAAGCTGGCCCTGGATGTGGAGATTGCCACCTACCGCAAGCTGCTGGAG
GGAGAGGAGTGCAGGATGTCTGGAGAATGTCAGAGTGCCGTGTGCATTTCAGTGGTCAGCAATGTCACCA
GCACAAGTGGCAGCTCTGGCAGTAGCCGTGGAGTTTTTGGAGGGGTCAGTGGCAGTGGCAGTGGTGGCTA
CAAAGGCGGCAGCAGCAGCAGCAGCAGCAGTGGCTATGGAGTCAGTGGCGGCAGCGGCAGTGGCTATGGA
GGGGTCAGCAGTGGCAGCACTGGGGGCAGGGGTAGCAGCGGGAGCTACCAGAGCAGCAGTAGTGGGAGCA
GGCTCGGCGGTGCAGGTAGCATCTCCGTGAGCCACAGTGGAATGGGCTCCAGCTCTGGCAGCATCCAGAC
TTCTGGAGGAAGTGGCTACAAGTCTGGTGGTGGAGGCAGCACCAGTATCCGCTTCTCCCAGACCACGAGC
TCAAGCCAGCATAGCTCCACCAAGTGA

Translation (638 aa):
MNRQVCKKSFSGRSQGFSGRSAVVSGSSRMSCVARSGGAGGGACGFRSGAGSFGSRSLYNLGSNKSISIS
VAAGSSRAGGFGGGRSSCGFAGGYGGGFGGSYGGGFGGGRGVGSGFGGAGGFGGAGGFGGPGVFGGPGSF
GGPGGFGPGGFPGGIQEVIVNQSLLQPLNVEIDPQIGQVKAQEREQIKTLNNKFASFIDKVRFLEQQNKV
LETKWELLQQQTTGSGPSSLEPCFESYISFLCKQLDSLLGERGNLEGELKSMQDLVEDFKKKYEDEINKR
TAAENEFVGLKKDVDAAFMNKVELQAKVDSLTDEVSFLRTLYEMELSQMQSHASDTSVVLSMDNNRCLDL
GSIIAEVRAQYEEIAQRSKSEAEALYQTKLGELQTTAGRHGDDLRNTKSEIMELNRMIQRLRAEIENVKK
QNANLQTAIAEAEQRGEMALKDANAKLQDLQTALQKAKDDLARLLRDYQELMNVKLALDVEIATYRKLLE
GEECRMSGECQSAVCISVVSNVTSTSGSSGSSRGVFGGVSGSGSGGYKGGSSSSSSSGYGVSGGSGSGYG
GVSSGSTGGRGSSGSYQSSSSGSRLGGAGSISVSHSGMGSSSGSIQTSGGSGYKSGGGGSTSIRFSQTTS
SSQHSSTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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