NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45371.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45371.1 Public Homo sapiens 16 CHTF18 24 110 108 CCDS HistoryNCBI Gene:63922Re-query CCDS DB by CCDS ID:45371.1Re-query CCDS DB by GeneID:63922See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45371.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262315.14 ENSP00000262315.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262315.14Link to Ensembl Protein Viewer:ENSP00000262315.9Re-query CCDS DB by Nucleotide ID:ENST00000262315Re-query CCDS DB by Protein ID:ENSP00000262315
Original member Current member NCBI NM_022092.3 NP_071375.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022092.3Link to Protein Sequence:NP_071375.1Re-query CCDS DB by Nucleotide ID:NM_022092Re-query CCDS DB by Protein ID:NP_071375Link to BLAST:NP_071375.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071375.1 975 Q8WVB6-1 975 100% 0 0

Chromosomal Locations for CCDS 45371.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 788685 788775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 788931 789125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 789210 789360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 789547 789715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 790177 790269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 790347 790399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 790525 790666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 791161 791370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 791851 791948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 792224 792347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 792439 792590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 792718 792811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 792966 793064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 793144 793274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 794054 794201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 795132 795356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 795685 795834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 795947 796077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 796717 796861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 796961 797092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 797694 797751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 797839 797975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2928 nt):
ATGGAGGACTACGAGCAGGAGCTGTGCGGCGTCGAGGATGATTTCCACAACCAGTTCGCGGCCGAGCTGG
AGGTGCTGGCAGAGCTGGAAGGGGCGTCGACTCCGTCGCCCTCCGGGGTCCCCCTGTTCACCGCGGGCCG
ACCCCCGCGGACGTTCGAGGAGGCCCTTGCCAGAGGGGACGCGGCCTCCAGTCCCGCCCCAGCCGCATCT
GTGGGCAGCAGCCAGGGCGGCGCCAGGAAGAGGCAGGTGGACGCCGACCTGCAGCCGGCCGGGTCCCTGC
CCCACGCCCCCAGGATCAAACGGCCTAGGCTGCAGGTGGTCAAGAGGCTGAACTTCAGATCGGAGGAGAT
GGAGGAGCCGCCCCCTCCCGACTCCTCGCCGACGGACATCACCCCGCCGCCGAGCCCTGAGGACCTCGCA
GAGCTTTGGGGCCACGGAGTCTCAGAAGCTGCTGCCGACGTGGGTCTCACACGGGCCTCACCAGCTGCCC
GCAATCCCGTCCTGAGGCGGCCCCCCATCTTGGAGGACTACGTCCACGTGACATCCACGGAGGGCGTCCG
GGCTTATCTGGTGCTGCGTGCTGACCCCATGGCCCCGGGGGTGCAGGGCTCTCTCCTCCACGTCCCATGG
CGAGGCGGTGGCCAGCTGGACCTGCTGGGTGTGTCCTTAGCCTCCCTGAAGAAGCAGGTCGACGGCGAGC
GGCGGGAGCGGCTGCTTCAGGAGGCCCAGAAGCTTTCAGACACCCTGCACAGTCTCAGGTCGGGGGAGGA
GGAGGCAGCCCAGCCCTTGGGGGCCCCTGAGGAGGAGCCGACTGACGGTCAAGACGCCTCCAGTCACTGC
CTCTGGGTGGATGAGTTTGCACCCCGCCACTACACGGAGCTGCTCAGTGATGACTTCACCAACCGCTGCC
TGCTCAAGTGGCTGAAGTTGTGGGACCTGGTGGTGTTTGGCCACGAGAGGCCTTCCCGGAAGCCCAGGCC
CAGTGTTGAGCCGGCCCGGGTCAGCAAGGAGGCCACAGCCCCAGGCAAGTGGAAGAGCCACGAACAGGTG
CTGGAGGAGATGCTGGAGGCTGGGCTGGACCCGAGCCAGCGACCGAAGCAGAAGGTGGCACTGCTCTGTG
GGCCCCCGGGGCTGGGGAAGACCACCCTGGCACACGTGATTGCGCGTCACGCGGGGTACTCTGTGGTGGA
GATGAACGCCAGTGACGACCGTAGCCCGGAGGTCTTCCGCACACGCATCGAGGCGGCCACCCAGATGGAG
TCGGTGCTGGGTGCTGGCGGGAAGCCCAACTGCCTGGTCATCGATGAGATCGACGGGGCCCCCGTGGCCG
CCATCAACGTCCTCCTGAGCATCCTGAACCGCAAGGGGCCACAGGAGGTGGGGCCACAGGGCCCGGCTGT
GCCTTCGGGAGGCGGCCGACGGCGCCGGGCAGAGGGGGGGCTCCTCATGAGGCCCATTATCTGCATTTGC
AATGACCAGTTCGCACCGTCCCTGCGGCAGCTGAAGCAGCAGGCCTTCCTGCTCCACTTCCCGCCGACTC
TGCCCTCGAGGCTGGTGCAGCGGCTCCAGGAGGTCTCCCTGCGGCAGGGCATGAGGGCCGACCCAGGGGT
GCTGGCCGCCCTCTGTGAGAAAACTGACAATGACATCCGGGCCTGCATCAACACCCTGCAGTTCCTGTAC
AGCCGGGGCCAGCGGGAGCTGAGCGTGCGGGACGTGCAGGCCACACGCGTGGGCCTCAAGGACCAGCGCA
GAGGGCTCTTCTCGGTGTGGCAGGAGGTCTTCCAGCTGCCTCGAGCCCAGAGGCGCCGTGTGGGCCAGGA
CCCCGCCCTGCCTGCTGACACACTCCTGCTGGGTGACGGGGACGCGGGCTCCCTCACCTCCGCCTCACAG
CGATTCTACCGTGTCCTGCATGCCGCTGCCTCTGCGGGCGAGCACGAGAAGGTGGTCCAGGGCTTGTTTG
ACAACTTCCTGCGTCTGCGGCTGCGAGACTCCAGCCTGGGTGCTGTGTGTGTGGCCCTCGACTGGCTGGC
CTTCGATGACCTGCTGGCGGGGGCTGCTCATCACAGCCAGAGCTTCCAGCTGCTGCGCTACCCACCCTTC
CTGCCCGTGGCCTTCCATGTGCTGTTTGCTTCCAGCCACACACCCAGGATCACCTTCCCCAGCAGCCAGC
AGGAGGCCCAGAACCGGATGAGCCAGATGAGGAACCTGATCCAGACGCTGGTGTCCGGCATCGCGCCAGC
CACGCGCAGCCGGGCCACGCCCCAGGCCCTGCTCCTCGATGCCCTCTGCCTGCTCCTGGACATTCTTGCA
CCCAAGCTCCGCCCCGTGAGCACACAGCTGTACAGCACCCGTGAAAAGCAACAGCTGGCCAGCCTGGTGG
GCACGATGCTCGCTTACAGCCTGACCTACCGCCAGGAGCGCACGCCCGATGGCCAGTACATCTACAGGCT
GGAGCCGAACGTGGAGGAACTCTGCCGCTTCCCTGAGCTGCCTGCCCGCAAGCCCCTCACCTACCAGACG
AAGCAGCTCATCGCCCGCGAGATCGAGGTGGAGAAGATGCGGCGGGCGGAGGCTTCTGCCCGGGTAGAGA
ACAGCCCCCAGGTGGATGGGAGCCCCCCAGGGCTCGAGGGTCTGCTGGGGGGCATTGGGGAGAAAGGGGT
GCACCGACCTGCCCCACGCAACCATGAGCAGCGGCTGGAGCACATCATGAGGCGAGCGGCCCGGGAGGAA
CAGCCTGAGAAGGACTTCTTTGGACGTGTGGTCGTCAGGAGCACAGCAGTCCCGAGTGCAGGGGACACGG
CCCCGGAGCAGGACTCAGTGGAGCGGCGCATGGGCACAGCGGTGGGCAGGAGCGAGGTCTGGTTCCGCTT
CAACGAGGGTGTCTCCAACGCCGTGCGGCGCAGCCTGTACATCAGGGACTTGCTCTAG

Translation (975 aa):
MEDYEQELCGVEDDFHNQFAAELEVLAELEGASTPSPSGVPLFTAGRPPRTFEEALARGDAASSPAPAAS
VGSSQGGARKRQVDADLQPAGSLPHAPRIKRPRLQVVKRLNFRSEEMEEPPPPDSSPTDITPPPSPEDLA
ELWGHGVSEAAADVGLTRASPAARNPVLRRPPILEDYVHVTSTEGVRAYLVLRADPMAPGVQGSLLHVPW
RGGGQLDLLGVSLASLKKQVDGERRERLLQEAQKLSDTLHSLRSGEEEAAQPLGAPEEEPTDGQDASSHC
LWVDEFAPRHYTELLSDDFTNRCLLKWLKLWDLVVFGHERPSRKPRPSVEPARVSKEATAPGKWKSHEQV
LEEMLEAGLDPSQRPKQKVALLCGPPGLGKTTLAHVIARHAGYSVVEMNASDDRSPEVFRTRIEAATQME
SVLGAGGKPNCLVIDEIDGAPVAAINVLLSILNRKGPQEVGPQGPAVPSGGGRRRRAEGGLLMRPIICIC
NDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDNDIRACINTLQFLY
SRGQRELSVRDVQATRVGLKDQRRGLFSVWQEVFQLPRAQRRRVGQDPALPADTLLLGDGDAGSLTSASQ
RFYRVLHAAASAGEHEKVVQGLFDNFLRLRLRDSSLGAVCVALDWLAFDDLLAGAAHHSQSFQLLRYPPF
LPVAFHVLFASSHTPRITFPSSQQEAQNRMSQMRNLIQTLVSGIAPATRSRATPQALLLDALCLLLDILA
PKLRPVSTQLYSTREKQQLASLVGTMLAYSLTYRQERTPDGQYIYRLEPNVEELCRFPELPARKPLTYQT
KQLIAREIEVEKMRRAEASARVENSPQVDGSPPGLEGLLGGIGEKGVHRPAPRNHEQRLEHIMRRAAREE
QPEKDFFGRVVVRSTAVPSAGDTAPEQDSVERRMGTAVGRSEVWFRFNEGVSNAVRRSLYIRDLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH