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Report for CCDS33376.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33376.1 Public Homo sapiens 2 MARCHF4 24 110 108 CCDS HistoryNCBI Gene:57574Re-query CCDS DB by CCDS ID:33376.1Re-query CCDS DB by GeneID:57574See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33376.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273067.5 ENSP00000273067.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273067.5Link to Ensembl Protein Viewer:ENSP00000273067.3Re-query CCDS DB by Nucleotide ID:ENST00000273067Re-query CCDS DB by Protein ID:ENSP00000273067
Original member Current member NCBI NM_020814.3 NP_065865.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020814.3Link to Protein Sequence:NP_065865.1Re-query CCDS DB by Nucleotide ID:NM_020814Re-query CCDS DB by Protein ID:NP_065865Link to BLAST:NP_065865.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065865.1 410 Q9P2E8 410 100% 0 0

Chromosomal Locations for CCDS 33376.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 216259312 216259679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 216277672 216277864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 216283574 216283729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 216369745 216370260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGCTGATGCCCCTGTGTGGGCTGCTCTGGTGGTGGTGGTGCTGCTGCTCCGGCTGGTACTGCTATGGAT
TGTGTGCCCCAGCCCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGCCGCATGCTCTTCAA
TGACCTGAAGGTTTTCTTACTGCGGCGCCCTCCTCAAGCGCCCCTGCCCATGCACGGCGACCCCCAGCCC
CCCGGTTTGGCGGCCAACAACACCCTTCCGGCTCTGGGCGCCGGGGGGTGGGCAGGCTGGAGGGGCCCCC
GAGAAGTGGTGGGCAGGGAGCCCCCTCCTGTGCCACCTCCACCCCCCTTGCCACCTTCTTCTGTGGAAGA
TGACTGGGGTGGCCCAGCCACAGAGCCACCTGCCTCGCTGCTCAGCAGTGCCTCCTCAGATGACTTCTGT
AAGGAGAAGACCGAGGATCGCTACTCACTGGGCAGCAGCTTGGACAGTGGTATGAGGACCCCACTCTGCC
GCATCTGCTTCCAGGGGCCAGAACAGGGGGAGCTGCTGAGCCCATGCCGCTGTGATGGCTCGGTCAAGTG
CACACACCAGCCTTGCCTCATCAAGTGGATCAGCGAGCGGGGCTGCTGGAGCTGCGAGCTGTGCTACTAC
AAGTACCACGTCATCGCCATAAGCACAAAAAATCCTCTGCAGTGGCAGGCCATCTCTCTGACGGTCATTG
AGAAGGTTCAGGTTGCAGCCGCCATCCTGGGCTCCCTCTTCCTCATCGCCAGTATTTCTTGGCTCATCTG
GTCAACTTTCAGCCCCTCGGCAAGATGGCAGCGCCAAGACCTTCTCTTCCAGATCTGCTACGGGATGTAT
GGCTTCATGGACGTGGTGTGCATAGGTCTCATCATCCATGAAGGACCCTCGGTGTACCGCATCTTTAAAC
GGTGGCAGGCTGTCAACCAGCAGTGGAAAGTGCTGAACTATGACAAGACAAAAGACCTGGAGGATCAAAA
GGCAGGAGGCAGGACCAACCCCCGGACCTCCTCATCCACCCAGGCCAATATCCCCTCCTCGGAAGAGGAG
ACCGCAGGCACCCCTGCCCCTGAGCAGGGCCCTGCCCAGGCTGCCGGCCACCCCTCAGGCCCTCTGTCCC
ATCACCACTGTGCTTATACCATCCTGCACATCCTGAGTCACTTGAGACCTCATGAACAGCGAAGTCCCCC
AGGCAGCAGCCGAGAGCTGGTCATGAGAGTCACGACAGTGTGA

Translation (410 aa):
MLMPLCGLLWWWWCCCSGWYCYGLCAPAPQMLRHQGLLKCRCRMLFNDLKVFLLRRPPQAPLPMHGDPQP
PGLAANNTLPALGAGGWAGWRGPREVVGREPPPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFC
KEKTEDRYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYY
KYHVIAISTKNPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQDLLFQICYGMY
GFMDVVCIGLIIHEGPSVYRIFKRWQAVNQQWKVLNYDKTKDLEDQKAGGRTNPRTSSSTQANIPSSEEE
TAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQRSPPGSSRELVMRVTTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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