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Report for CCDS13433.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13433.1 Public Homo sapiens 20 ADNP 24 110 108 CCDS HistoryNCBI Gene:23394Re-query CCDS DB by CCDS ID:13433.1Re-query CCDS DB by GeneID:23394See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13433.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349014.8 ENSP00000342905.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000349014.8Link to Ensembl Protein Viewer:ENSP00000342905.3Re-query CCDS DB by Nucleotide ID:ENST00000349014Re-query CCDS DB by Protein ID:ENSP00000342905
Original member Current member EBI ENST00000371602.9 ENSP00000360662.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371602.9Link to Ensembl Protein Viewer:ENSP00000360662.2Re-query CCDS DB by Nucleotide ID:ENST00000371602Re-query CCDS DB by Protein ID:ENSP00000360662
Original member Current member EBI ENST00000396029.8 ENSP00000379346.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396029.8Link to Ensembl Protein Viewer:ENSP00000379346.3Re-query CCDS DB by Nucleotide ID:ENST00000396029Re-query CCDS DB by Protein ID:ENSP00000379346
Original member Current member EBI ENST00000396032.8 ENSP00000379349.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396032.8Link to Ensembl Protein Viewer:ENSP00000379349.2Re-query CCDS DB by Nucleotide ID:ENST00000396032Re-query CCDS DB by Protein ID:ENSP00000379349
Original member Current member EBI ENST00000621696.5 ENSP00000483881.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000621696.5Link to Ensembl Protein Viewer:ENSP00000483881.1Re-query CCDS DB by Nucleotide ID:ENST00000621696Re-query CCDS DB by Protein ID:ENSP00000483881
Original member Current member NCBI NM_001282531.3 NP_001269460.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001282531.3Link to Protein Sequence:NP_001269460.1Re-query CCDS DB by Nucleotide ID:NM_001282531Re-query CCDS DB by Protein ID:NP_001269460Link to BLAST:NP_001269460.1
Original member Current member NCBI NM_001282532.2 NP_001269461.1 Accepted alive Link to Nucleotide Sequence:NM_001282532.2Link to Protein Sequence:NP_001269461.1Re-query CCDS DB by Nucleotide ID:NM_001282532Re-query CCDS DB by Protein ID:NP_001269461Link to BLAST:NP_001269461.1
Original member Current member NCBI NM_001347511.2 NP_001334440.1 Accepted alive Link to Nucleotide Sequence:NM_001347511.2Link to Protein Sequence:NP_001334440.1Re-query CCDS DB by Nucleotide ID:NM_001347511Re-query CCDS DB by Protein ID:NP_001334440Link to BLAST:NP_001334440.1
Original member Current member NCBI NM_015339.5 NP_056154.1 Accepted alive Link to Nucleotide Sequence:NM_015339.5Link to Protein Sequence:NP_056154.1Re-query CCDS DB by Nucleotide ID:NM_015339Re-query CCDS DB by Protein ID:NP_056154Link to BLAST:NP_056154.1
Original member Current member NCBI NM_181442.4 NP_852107.1 Accepted alive Link to Nucleotide Sequence:NM_181442.4Link to Protein Sequence:NP_852107.1Re-query CCDS DB by Nucleotide ID:NM_181442Re-query CCDS DB by Protein ID:NP_852107Link to BLAST:NP_852107.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269460.1 1102 Q9H2P0 1102 100% 0 0
NP_001269461.1 1102 Q9H2P0 1102 100% 0 0
NP_001334440.1 1102 Q9H2P0 1102 100% 0 0
NP_056154.1 1102 Q9H2P0 1102 100% 0 0
NP_852107.1 1102 Q9H2P0 1102 100% 0 0

Chromosomal Locations for CCDS 13433.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 50891405 50894512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 50902017 50902109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 50903889 50903996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3309 nt):
ATGTTCCAACTTCCTGTCAACAATCTTGGCAGTTTAAGAAAAGCCCGGAAAACTGTGAAAAAAATACTTA
GTGACATTGGGTTGGAATACTGTAAAGAACATATAGAAGATTTTAAACAATTTGAACCTAATGACTTTTA
TTTGAAAAACACTACATGGGAGGATGTAGGACTGTGGGACCCATCACTTACGAAAAACCAGGACTATCGG
ACAAAACCTTTCTGCTGCAGCGCTTGTCCATTTTCCTCAAAATTCTTCTCTGCCTACAAAAGTCATTTCC
GCAATGTCCATAGTGAAGACTTTGAAAATAGGATTCTCCTTAATTGCCCCTACTGTACCTTCAATGCAGA
CAAAAAGACTTTGGAAACACACATTAAAATATTTCATGCTCCGAACGCCAGCGCACCAAGTAGCAGCCTC
AGCACTTTCAAAGATAAAAACAAAAATGATGGCCTTAAACCTAAGCAGGCTGACAGTGTAGAGCAAGCTG
TTTATTACTGTAAGAAGTGCACTTACCGAGATCCTCTTTATGAAATAGTTAGGAAGCACATTTACAGGGA
ACATTTTCAGCATGTGGCAGCACCTTACATAGCAAAGGCAGGAGAAAAATCACTCAATGGGGCAGTCCCC
TTAGGCTCGAATGCCCGAGAAGAGAGTAGTATTCACTGCAAGCGATGCCTTTTCATGCCAAAGTCCTATG
AAGCTTTGGTACAGCATGTCATCGAAGACCATGAACGTATAGGCTATCAGGTCACTGCCATGATTGGGCA
CACAAATGTAGTGGTTCCCCGATCCAAACCCTTGATGCTAATTGCTCCCAAACCTCAAGACAAGAAGAGC
ATGGGACTCCCACCAAGGATCGGTTCCCTTGCTTCTGGAAATGTCCGGTCTTTACCATCACAGCAGATGG
TGAATCGACTCTCAATACCAAAGCCTAACTTAAATTCTACAGGAGTCAACATGATGTCCAGTGTTCATCT
GCAGCAGAACAACTATGGAGTCAAATCTGTAGGCCAGGGTTACAGTGTTGGTCAGTCAATGAGACTGGGT
CTAGGTGGCAACGCACCAGTTTCCATTCCTCAACAATCTCAGTCTGTAAAGCAGTTACTTCCAAGTGGAA
ACGGAAGGTCTTATGGGCTTGGGTCAGAGCAGAGGTCCCAGGCACCAGCAAGATACTCCCTGCAGTCTGC
TAATGCCTCTTCTCTCTCATCGGGCCAGTTAAAGTCTCCTTCCCTCTCTCAGTCACAGGCATCCAGAGTG
TTAGGTCAGTCCAGTTCCAAACCTGCTGCAGCTGCCACAGGCCCTCCCCCAGGTAACACTTCCTCAACTC
AAAAGTGGAAAATATGTACAATCTGTAATGAGCTTTTTCCTGAAAATGTCTATAGTGTGCACTTCGAAAA
AGAACATAAAGCTGAGAAAGTCCCAGCAGTAGCCAACTACATTATGAAAATACACAATTTTACTAGCAAA
TGCCTCTACTGTAATCGCTATTTACCCACAGATACTCTGCTCAACCATATGTTAATTCATGGTCTGTCTT
GTCCATATTGCCGTTCAACTTTCAATGATGTGGAAAAGATGGCCGCACACATGCGGATGGTTCACATTGA
TGAAGAGATGGGACCTAAAACAGATTCTACTTTGAGTTTTGATTTGACATTGCAGCAGGGTAGTCACACT
AACATCCATCTCCTGGTAACTACATACAATCTGAGGGATGCCCCAGCTGAATCTGTTGCTTACCATGCCC
AAAATAATCCTCCAGTTCCTCCAAAGCCACAGCCAAAGGTTCAGGAAAAGGCAGATATCCCTGTAAAAAG
TTCACCTCAAGCTGCAGTGCCCTATAAAAAAGATGTTGGGAAAACCCTTTGTCCTCTTTGCTTTTCAATC
CTAAAAGGACCCATATCTGATGCACTTGCACATCACTTACGAGAGAGGCACCAAGTTATTCAGACGGTTC
ATCCAGTTGAGAAAAAGCTCACCTACAAATGTATCCATTGCCTTGGTGTGTATACCAGCAACATGACCGC
CTCAACTATCACTCTGCATCTAGTTCACTGCAGGGGCGTTGGAAAGACCCAAAATGGCCAGGATAAGACA
AATGCACCCTCTCGGCTTAATCAGTCTCCAAGTCTGGCACCTGTGAAGCGCACTTACGAGCAAATGGAAT
TTCCCTTACTGAAAAAACGAAAGTTAGATGATGATAGTGATTCACCCAGCTTCTTTGAAGAGAAGCCTGA
AGAGCCTGTTGTTTTAGCTTTAGACCCCAAGGGTCATGAAGATGATTCCTATGAAGCCAGGAAAAGCTTT
CTAACAAAGTATTTCAACAAACAGCCCTATCCCACCAGGAGAGAAATTGAGAAGCTAGCAGCCAGTTTAT
GGTTATGGAAGAGTGACATCGCTTCCCATTTTAGTAACAAAAGGAAGAAGTGTGTCCGTGATTGTGAAAA
GTACAAGCCTGGCGTGTTGCTGGGGTTTAACATGAAAGAATTAAATAAAGTCAAGCATGAGATGGATTTT
GATGCTGAGTGGCTATTTGAAAATCATGATGAGAAGGATTCCAGAGTCAATGCTAGTAAGACTGCTGACA
AAAAGCTCAACCTTGGGAAGGAAGATGACAGTTCCTCAGACAGTTTTGAAAATTTGGAAGAAGAATCCAA
TGAAAGTGGTAGCCCTTTTGACCCTGTTTTTGAAGTTGAACCTAAAATCTCTAACGATAACCCAGAGGAA
CATGTACTGAAGGTAATTCCTGAGGATGCTTCAGAATCTGAGGAGAAGCTAGACCAAAAAGAGGATGGTT
CAAAATACGAAACTATTCATTTGACTGAGGAACCAACCAAACTAATGCACAATGCATCTGATAGTGAGGT
TGACCAAGACGATGTTGTTGAGTGGAAAGACGGTGCTTCTCCATCTGAGAGTGGGCCTGGATCCCAACAA
GTGTCAGACTTTGAGGACAATACCTGCGAAATGAAACCAGGAACCTGGTCTGACGAGTCTTCCCAAAGCG
AAGATGCAAGGAGCAGTAAGCCAGCTGCCAAAAAAAAGGCTACCATGCAAGGTGACAGAGAGCAGTTGAA
ATGGAAGAATAGTTCCTATGGAAAAGTTGAAGGGTTTTGGTCTAAGGACCAGTCACAGTGGAAGAATGCA
TCTGAGAATGATGAGCGCTTATCTAACCCCCAGATTGAGTGGCAGAATAGCACAATTGACAGTGAGGATG
GGGAACAGTTTGACAACATGACTGATGGAGTAGCTGAGCCCATGCATGGCAGCTTAGCCGGAGTTAAACT
GAGCAGCCAACAGGCCTAA

Translation (1102 aa):
MFQLPVNNLGSLRKARKTVKKILSDIGLEYCKEHIEDFKQFEPNDFYLKNTTWEDVGLWDPSLTKNQDYR
TKPFCCSACPFSSKFFSAYKSHFRNVHSEDFENRILLNCPYCTFNADKKTLETHIKIFHAPNASAPSSSL
STFKDKNKNDGLKPKQADSVEQAVYYCKKCTYRDPLYEIVRKHIYREHFQHVAAPYIAKAGEKSLNGAVP
LGSNAREESSIHCKRCLFMPKSYEALVQHVIEDHERIGYQVTAMIGHTNVVVPRSKPLMLIAPKPQDKKS
MGLPPRIGSLASGNVRSLPSQQMVNRLSIPKPNLNSTGVNMMSSVHLQQNNYGVKSVGQGYSVGQSMRLG
LGGNAPVSIPQQSQSVKQLLPSGNGRSYGLGSEQRSQAPARYSLQSANASSLSSGQLKSPSLSQSQASRV
LGQSSSKPAAAATGPPPGNTSSTQKWKICTICNELFPENVYSVHFEKEHKAEKVPAVANYIMKIHNFTSK
CLYCNRYLPTDTLLNHMLIHGLSCPYCRSTFNDVEKMAAHMRMVHIDEEMGPKTDSTLSFDLTLQQGSHT
NIHLLVTTYNLRDAPAESVAYHAQNNPPVPPKPQPKVQEKADIPVKSSPQAAVPYKKDVGKTLCPLCFSI
LKGPISDALAHHLRERHQVIQTVHPVEKKLTYKCIHCLGVYTSNMTASTITLHLVHCRGVGKTQNGQDKT
NAPSRLNQSPSLAPVKRTYEQMEFPLLKKRKLDDDSDSPSFFEEKPEEPVVLALDPKGHEDDSYEARKSF
LTKYFNKQPYPTRREIEKLAASLWLWKSDIASHFSNKRKKCVRDCEKYKPGVLLGFNMKELNKVKHEMDF
DAEWLFENHDEKDSRVNASKTADKKLNLGKEDDSSSDSFENLEEESNESGSPFDPVFEVEPKISNDNPEE
HVLKVIPEDASESEEKLDQKEDGSKYETIHLTEEPTKLMHNASDSEVDQDDVVEWKDGASPSESGPGSQQ
VSDFEDNTCEMKPGTWSDESSQSEDARSSKPAAKKKATMQGDREQLKWKNSSYGKVEGFWSKDQSQWKNA
SENDERLSNPQIEWQNSTIDSEDGEQFDNMTDGVAEPMHGSLAGVKLSSQQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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