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Report for CCDS635.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
635.1 Public Homo sapiens 1 DNAI4 24 110 108 CCDS HistoryNCBI Gene:79819Re-query CCDS DB by CCDS ID:635.1Re-query CCDS DB by GeneID:79819See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 635.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371026.8 ENSP00000360065.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371026.8Link to Ensembl Protein Viewer:ENSP00000360065.3Re-query CCDS DB by Nucleotide ID:ENST00000371026Re-query CCDS DB by Protein ID:ENSP00000360065
Original member Current member NCBI NM_024763.5 NP_079039.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024763.5Link to Protein Sequence:NP_079039.4Re-query CCDS DB by Nucleotide ID:NM_024763Re-query CCDS DB by Protein ID:NP_079039Link to BLAST:NP_079039.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079039.4 848 Q5VTH9-1 848 100% 0 0

Chromosomal Locations for CCDS 635.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 66814130 66814180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66822361 66822517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66826820 66827046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66827812 66827910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66833585 66833706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66833991 66834148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66835626 66835777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66837710 66837796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66840469 66840671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66847484 66847678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66862147 66862302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66871370 66871509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66874781 66874937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66891154 66891266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66893229 66893413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66905201 66905375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 66924662 66924831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2547 nt):
ATGACGCCCGGCAAACATTCCGGAGCCTCGGCCCGAGCCGCTAACGGAGGAGCTTGGGGGTACAGGGACT
TCAGAGGCGGCCAAAAAAAGGGGTGGTGCACCACTCCCCAGCTGGTCGCCACCATGCCAGTCTCTCCGGC
AGGCAGTCACAAGCAGCAGAACTTCGGGTTGAACAATGCCACACAACCAAAGAAGTCTATTAGCTTTTTT
GCTACAATGAAAGCAACTTCAGTGAAAGGATATACTGGTGCAAATCAAAGCAGAATGGCTGTGTCCAAAA
CCGTGCTTATTCCACCTGAACTGAAAACTGTAGAAAAACCAAATCCCAATATAAAGACAACACAGGTATT
TGACATAAATGGAACTGATGTTACTCCCCGACCTCTTTACCATCCAGATCCACTTACTGGTACAGCAAAA
CCAAGTAAACTCTTGACATCACAAGAAGGATCACTTGGATCAGAATTTATATCTTCCTATAGCCTTTATC
AGAATACAATAAATCCTAGTACGTTAGGGCAGTTTACAAGGTCAGTTTTAGGAAGCAGTACAGTTTCTAA
GTCAAGTGTATCAGCAAGTGAATCAATAGCAGAAGACCTGGAAGAACCATCCTATAAACGGGAAAGATTG
ACTAGTTTCACAGATTTGCAAGTTATAAGGGCAGCACCTGAAAAAATTGTAACAAAAGAAGACCTGGAGA
AGAATATAGAGATAATACTCACAGAGACAGAAACACTGAGATTTTTTGACTTGCCCACAGTCATGGTCTC
TGTAGAATCTGAAGAAGCTGAGAAAGTAACTCAGAGAAACAAGAATTATGAAGTCCTTTGTAGAAACAGA
TTAGGCAATGACCTATATGTTGAAAGGATGATGCAGACTTTCAATGGAGCACCAAAGAATAAAGATGTTC
AATGTGATAAAATCATAATGGAAGATAAAGGCATAATGTCCACTGCCTGGGATTTGTATGATTCTTACAA
TGCTATGGAACTTGTATCTTTATCAGTAAAACAATCTGTGGTTGAGTCAAGTAGTAAAGCAAATGTACTT
CCTAAAGATCAGGACCAAAGATTGCCAGGGAGCACTACAGAAAAAAATAGTGAAACTAGTTCTCTAATGG
ACATAGAAAATGTAATTCTGGCAAAAATCCATGAAGATGAGGAAGACCACTCAGATGCAATATTAAAATC
TGACAAATTTCATCAGGACTTATTTTTTATGGAACGGGTTCTGATGGAAAATATATTTCAGCCCAAACTT
GCAGCTTATCGTCAGCTTCCTGTTTTAAAAGAACCTGAACCTGAAGAGCCTGAAGATGTTTTAGAAAGTG
CAAAACATGAAGAGGTAGAGGAAGAATCTAAGAAGGAGGAGGAAGAAGAAATACATGCAGAAGAATCAAC
AATACCCGCCAACTTGGAACGACTTTGGTCTTTTTCCTGTGACTTAACCAAAGGCCTCAATGTGAGCAGC
CTTGCCTGGAATAAAACAAATCCAGATCTTTTGGCTGTTGGCTATGGGCACTTTGGATTTAAAGAGCAAA
AAAGAGGACTGGCTTGCTGCTGGTCAATAAAGAATCCCATGTGGCCAGAACGTATTTATCAGAGTCCATA
TGGAGTTACTGCTGTGGATTTTTCAATTGGAGCACCTAACCTTTTAGCCGTTGGCTATCACAATGGCACA
ATTGCAATTTACAATGTACGGAGCAACAGTAATGTTCCAGTTCTGGATAGTAGTGAATCACCTCAAAAAC
ATTTGGGACCTGTATGGCAACTACAGTGGATAGAACAAGATCGAGGAACAACAGGAGATGGCAAAAGAGA
AATACTAGTTTCTATATCAGCAGATGGAAGAATCTCCAAATGGGTTATACGAAAAGGACTAGACTGTTAT
GATTTGATGCGATTAAAGAGAACTACAGCTGCCAGTAACAAAAAAGGAGGGGAAAAGGAAAAGAAAGATG
AAGCTTTGATATCTCGACAGGCTCCTGGAATGTGTTTTGCTTTTCATCCCAAGGACACAAATATCTATTT
GGCTGGCACTGAAGAAGGTCATATTCACAAATGTTCTTGTTCATATAATGAACAATACTTAGATACCTAC
AGAGGACATAAGGGTCCAGTGTATAAAGTGACATGGAATCCATTTTGTCATGATGTATTTTTAAGCTGTT
CTGCAGATTGGGGTGTTATTATATGGCAACAGGAGAATGTCAAGCCATCTTTGAGTTTTTATCCAGCTAC
TTCTGTTGTTTACGACGTTGCCTGGTCTCCAAAATCATCCTATATATTTGCAGCTGCAAATGAGAACAGG
GTGGAGATTTGGGACCTTCATATCAGCACTTTGGACCCTCTGATTGTGAATACTGCTAACCCTGGAATCA
AGTTCACAACCATTCTCTTTGCCAAACAAACAGATTGCCTTCTGGTAGGAGACAGTGATGGACAGGTTTC
TGTGTATGAACTGAGAAATATGCCTACTGTTTTGGAAACTGGCCGGGGAGATATAATGGATACTTTGCTT
GGATCCAAGTCAAACCAATCAGCATAA

Translation (848 aa):
MTPGKHSGASARAANGGAWGYRDFRGGQKKGWCTTPQLVATMPVSPAGSHKQQNFGLNNATQPKKSISFF
ATMKATSVKGYTGANQSRMAVSKTVLIPPELKTVEKPNPNIKTTQVFDINGTDVTPRPLYHPDPLTGTAK
PSKLLTSQEGSLGSEFISSYSLYQNTINPSTLGQFTRSVLGSSTVSKSSVSASESIAEDLEEPSYKRERL
TSFTDLQVIRAAPEKIVTKEDLEKNIEIILTETETLRFFDLPTVMVSVESEEAEKVTQRNKNYEVLCRNR
LGNDLYVERMMQTFNGAPKNKDVQCDKIIMEDKGIMSTAWDLYDSYNAMELVSLSVKQSVVESSSKANVL
PKDQDQRLPGSTTEKNSETSSLMDIENVILAKIHEDEEDHSDAILKSDKFHQDLFFMERVLMENIFQPKL
AAYRQLPVLKEPEPEEPEDVLESAKHEEVEEESKKEEEEEIHAEESTIPANLERLWSFSCDLTKGLNVSS
LAWNKTNPDLLAVGYGHFGFKEQKRGLACCWSIKNPMWPERIYQSPYGVTAVDFSIGAPNLLAVGYHNGT
IAIYNVRSNSNVPVLDSSESPQKHLGPVWQLQWIEQDRGTTGDGKREILVSISADGRISKWVIRKGLDCY
DLMRLKRTTAASNKKGGEKEKKDEALISRQAPGMCFAFHPKDTNIYLAGTEEGHIHKCSCSYNEQYLDTY
RGHKGPVYKVTWNPFCHDVFLSCSADWGVIIWQQENVKPSLSFYPATSVVYDVAWSPKSSYIFAAANENR
VEIWDLHISTLDPLIVNTANPGIKFTTILFAKQTDCLLVGDSDGQVSVYELRNMPTVLETGRGDIMDTLL
GSKSNQSA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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