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Report for CCDS31791.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31791.2 Public Homo sapiens 12 DDN 24 110 108 CCDS HistoryNCBI Gene:23109Re-query CCDS DB by CCDS ID:31791.2Re-query CCDS DB by GeneID:23109See the combined annotation on chromosome 12 in Sequence Viewer

Public Note for CCDS 31791.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 31791.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000421952.3 ENSP00000390590.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000421952.3Link to Ensembl Protein Viewer:ENSP00000390590.2Re-query CCDS DB by Nucleotide ID:ENST00000421952Re-query CCDS DB by Protein ID:ENSP00000390590
Original member Current member NCBI NM_015086.2 NP_055901.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015086.2Link to Protein Sequence:NP_055901.2Re-query CCDS DB by Nucleotide ID:NM_015086Re-query CCDS DB by Protein ID:NP_055901Link to BLAST:NP_055901.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055901.2 711 O94850 711 100% 0 0

Chromosomal Locations for CCDS 31791.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 48996740 48998666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48999079 48999287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2136 nt):
ATGCTGGATGGCCCACTGTTCTCCGAGGGGCCTGACAGCCCCCGGGAGCTCCAGGATGAGGAGTCTGGCA
GCTGCCTCTGGGTGCAGAAGTCCAAGCTATTGGTGATAGAAGTGAAGACTATTTCCTGTCATTATAGTCG
CCGCGCCCCTTCTCGACAGCCCATGGACTTCCAGGCCAGCCACTGGGCTCGCGGGTTCCAGAACCGCACG
TGTGGGCCGCGCCCGGGATCCCCACAGCCGCCGCCCCGCCGGCCCTGGGCCTCCAGGGTGCTGCAGGAGG
CGACCAACTGGCGGGCGGGGCCCCTGGCCGAGGTCCGAGCTCGGGAGCAAGAGAAAAGGAAAGCGGCGTC
GCAGGAGCGGGAGGCCAAGGAGACCGAGCGAAAAAGGCGCAAGGCTGGTGGGGCCCGACGGAGCCCCCCG
GGTCGACCCCGCCCGGAGCCCCGCAACGCCCCTCGGGTGGCCCAGCTGGCAGGGCTCCCTGCTCCCTTGC
GGCCGGAGCGCCTGGCGCCTGTGGGGCGAGCGCCCCGTCCATCCGCGCAGCCGCAGAGCGACCCAGGGTC
GGCGTGGGCGGGGCCCTGGGGAGGTCGGCGGCCCGGGCCCCCAAGCTACGAGGCTCACCTGCTGCTGAGA
GGTTCTGCCGGGACCGCCCCACGACGCCGCTGGGACCGGCCGCCACCCTACGTGGCTCCACCTTCTTACG
AAGGCCCCCATAGGACCTTGGGGACTAAGAGAGGCCCCGGGAACTCTCAGGTGCCCACTTCATCAGCCCC
AGCTGCGACTCCAGCCAGGACAGACGGAGGGCGCACAAAGAAGAGGCTGGATCCTCGGATCTACCGGGAC
GTCCTCGGGGCTTGGGGTCTCCGACAGGGGCAAGGTCTCTTGGGGGGATCCCCAGGCTGTGGAGCGGCCA
GAGCAAGGCCAGAGCCCGGCAAGGGGGTCGTGGAGAAAAGCCTGGGGCTGGCTGCTGCTGACCTGAACAG
TGGTAGCGACAGCCATCCCCAAGCCAAAGCTACAGGGAGCGCAGGCACCGAGATAGCTCCTGCGGGGTCT
GCAACTGCGGCTCCCTGTGCCCCGCATCCCGCTCCCAGATCCAGGCACCACCTCAAGGGCTCGAGGGAAG
GGAAAGAAGGAGAACAGATCTGGTTTCCCAAATGCTGGATTCCCTCCCCTAAAAAGCAGCCGCCCCGCCA
TAGCCAGACACTCCCCAGACCCTGGGCTCCCGGAGGCACCGGATGGAGAGAATCTCTGGGTCTTGGAGAG
GGGGCAGGACCGGAGACCCTGGAGGGTTGGAAGGCGACCCGCCGTGCCCACACCTTGCCCCGCAGTTCCC
AGGGCCTGTCCCGTGGGGAAGGCGTCTTTGTCATTGACGCCACGTGCGTAGTGATACGATCCCAATATGT
TCCAACCCCCCGAACCCAGCAGGTGCAGCTTTTGCCCTCTGGGGTGACACGCGTGGTGGGGGATTCCCCC
AGCCAATCGAAGCCCGGCAAGGAGGAGGGTGAAGGGGCCACGGTCTTTCCTTCCCCTTGTCAAAAGCGGC
TGTCGAGCAGTCGCCTTTTACACCAGCCCGGCGGGGGCCGCGGGGGCGAAGCTGAGGGCGGGAGGCCGGG
GGACTCCACACTGGAGGAGCGCACTTTCCGCATCTTGGGGCTCCCGGCCCCCGAAGTAAACCTGCGGGAC
GCCCCCACGCAGCCAGGTAGCCCAGAGCACCAAGCCTTAGGCCCAGCAGCTTCGGGAGCCCAGGGCAGAG
CCGAGGGGTCGGAAGTGGCGGTGGTCCAGCGGCGCGCCGGCCGGGGCTGGGCGCGGACCCCAGGGCCCTA
CGCCGGGGCCCTGCGAGAAGCCGTGTCCCGTATCCGCCGCCACACAGCCCCTGACTCGGACACGGACGAA
GCTGAGGAGCTCAGCGTCCATAGCGGCTCCTCTGATGGAAGCGACACAGAAGCCCCGGGCGCCTCCTGGC
GGAATGAGAGGACCCTGCCCGAGGTTGGAAACAGTTCGCCAGAGGAAGATGGGAAGACAGCGGAACTGAG
CGACAGTGTCGGGGAGATCCTAGATGTCATAAGCCAAACCGAGGAGGTCCTCTTCGGGGTGAGGGACATC
AGAGGGACCCAACAGGGAAATAGGAAGAGGCAGTGA

Translation (711 aa):
MLDGPLFSEGPDSPRELQDEESGSCLWVQKSKLLVIEVKTISCHYSRRAPSRQPMDFQASHWARGFQNRT
CGPRPGSPQPPPRRPWASRVLQEATNWRAGPLAEVRAREQEKRKAASQEREAKETERKRRKAGGARRSPP
GRPRPEPRNAPRVAQLAGLPAPLRPERLAPVGRAPRPSAQPQSDPGSAWAGPWGGRRPGPPSYEAHLLLR
GSAGTAPRRRWDRPPPYVAPPSYEGPHRTLGTKRGPGNSQVPTSSAPAATPARTDGGRTKKRLDPRIYRD
VLGAWGLRQGQGLLGGSPGCGAARARPEPGKGVVEKSLGLAAADLNSGSDSHPQAKATGSAGTEIAPAGS
ATAAPCAPHPAPRSRHHLKGSREGKEGEQIWFPKCWIPSPKKQPPRHSQTLPRPWAPGGTGWRESLGLGE
GAGPETLEGWKATRRAHTLPRSSQGLSRGEGVFVIDATCVVIRSQYVPTPRTQQVQLLPSGVTRVVGDSP
SQSKPGKEEGEGATVFPSPCQKRLSSSRLLHQPGGGRGGEAEGGRPGDSTLEERTFRILGLPAPEVNLRD
APTQPGSPEHQALGPAASGAQGRAEGSEVAVVQRRAGRGWARTPGPYAGALREAVSRIRRHTAPDSDTDE
AEELSVHSGSSDGSDTEAPGASWRNERTLPEVGNSSPEEDGKTAELSDSVGEILDVISQTEEVLFGVRDI
RGTQQGNRKRQ


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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