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Report for CCDS6687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6687.1 Public Homo sapiens 9 DIRAS2 24 110 108 CCDS HistoryNCBI Gene:54769Re-query CCDS DB by CCDS ID:6687.1Re-query CCDS DB by GeneID:54769See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6687.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375765.5 ENSP00000364919.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375765.5Link to Ensembl Protein Viewer:ENSP00000364919.3Re-query CCDS DB by Nucleotide ID:ENST00000375765Re-query CCDS DB by Protein ID:ENSP00000364919
Original member Current member NCBI NM_017594.5 NP_060064.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017594.5Link to Protein Sequence:NP_060064.2Re-query CCDS DB by Nucleotide ID:NM_017594Re-query CCDS DB by Protein ID:NP_060064Link to BLAST:NP_060064.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060064.2 199 Q96HU8 199 100% 0 0

Chromosomal Locations for CCDS 6687.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 90613228 90613827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGCCTGAGCAGAGTAACGATTACCGGGTGGCCGTGTTTGGGGCTGGCGGTGTTGGCAAGAGCTCCCTGG
TGTTGAGGTTTGTGAAAGGCACATTCCGGGAGAGCTACATCCCGACGGTGGAAGACACCTACCGGCAAGT
GATCAGCTGTGACAAGAGCATATGCACATTGCAGATCACCGACACGACGGGGAGCCACCAGTTCCCGGCC
ATGCAGCGGCTGTCCATCTCCAAAGGGCACGCCTTCATCCTGGTGTACTCCATTACCAGCCGACAGTCCT
TGGAGGAGCTCAAGCCCATCTACGAACAAATCTGCGAGATCAAAGGGGACGTGGAGAGCATCCCCATCAT
GCTGGTGGGGAACAAGTGTGATGAGAGCCCCAGCCGCGAGGTGCAGAGCAGCGAGGCGGAGGCCTTGGCC
CGCACATGGAAGTGTGCCTTCATGGAGACCTCAGCCAAGCTCAACCATAACGTGAAGGAGCTTTTCCAGG
AGCTGCTCAACCTGGAGAAGCGCAGGACCGTGAGTCTCCAGATCGACGGGAAAAAGAGCAAGCAGCAGAA
AAGGAAAGAGAAGCTCAAAGGCAAGTGCGTGATCATGTGA

Translation (199 aa):
MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPA
MQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVGNKCDESPSREVQSSEAEALA
RTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDGKKSKQQKRKEKLKGKCVIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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