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Report for CCDS439.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
439.1 Public Homo sapiens 1 HEYL 24 110 108 CCDS HistoryNCBI Gene:26508Re-query CCDS DB by CCDS ID:439.1Re-query CCDS DB by GeneID:26508See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 439.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372852.4 ENSP00000361943.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372852.4Link to Ensembl Protein Viewer:ENSP00000361943.3Re-query CCDS DB by Nucleotide ID:ENST00000372852Re-query CCDS DB by Protein ID:ENSP00000361943
Original member Current member NCBI NM_014571.4 NP_055386.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014571.4Link to Protein Sequence:NP_055386.2Re-query CCDS DB by Nucleotide ID:NM_014571Re-query CCDS DB by Protein ID:NP_055386Link to BLAST:NP_055386.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055386.2 328 Q9NQ87 328 100% 0 0

Chromosomal Locations for CCDS 439.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 39626507 39627180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39630227 39630308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39631496 39631579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39632649 39632715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 39639546 39639625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGAAGCGACCCAAGGAGCCGAGCGGCTCCGACGGGGAGTCCGACGGACCCATCGACGTGGGCCAAGAGG
GCCAGCTGAGCCAGATGGCCAGGCCGCTGTCCACCCCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAACA
CAGAGGGATCATAGAGAAACGGCGTCGAGACCGCATCAACAGTAGCCTTTCTGAATTGCGACGCTTGGTC
CCCACTGCCTTTGAGAAACAGGGCTCTTCCAAGCTGGAGAAAGCCGAGGTCTTGCAGATGACGGTGGATC
ACTTGAAAATGCTCCATGCCACTGGTGGGACAGGATTCTTTGATGCCCGAGCCCTGGCAGTTGACTTCCG
GAGCATTGGTTTTCGGGAGTGCCTCACTGAGGTCATCAGGTACCTGGGGGTCCTTGAAGGGCCCAGCAGC
CGTGCAGACCCCGTCCGGATTCGCCTTCTCTCCCACCTCAACAGCTACGCAGCCGAGATGGAGCCTTCGC
CCACGCCCACTGGCCCTTTGGCCTTCCCTGCCTGGCCCTGGTCTTTCTTCCATAGCTGTCCAGGGCTGCC
AGCCCTGAGCAACCAGCTCGCCATCCTGGGAAGAGTGCCCAGCCCTGTCCTCCCCGGTGTCTCCTCTCCT
GCTTACCCCATCCCAGCCCTCCGAACCGCTCCCCTTCGCAGAGCCACAGGCATCATCCTGCCAGCCCGGA
GGAATGTGCTGCCCAGTCGAGGGGCATCTTCCACCCGGAGGGCCCGCCCCCTAGAGAGGCCAGCGACCCC
TGTGCCTGTCGCCCCCAGCAGCAGGGCTGCCAGGAGCAGCCACATCGCTCCCCTCCTGCAGTCTTCCTCC
CCAACACCCCCTGGTCCTACAGGGTCGGCTGCTTACGTGGCTGTTCCCACCCCCAACTCATCCTCCCCAG
GGCCAGCTGGGAGGCCAGCGGGAGCCATGCTCTACCACTCCTGGGTCTCTGAAATCACTGAAATCGGGGC
TTTCTGA

Translation (328 aa):
MKRPKEPSGSDGESDGPIDVGQEGQLSQMARPLSTPSSSQMQARKKHRGIIEKRRRDRINSSLSELRRLV
PTAFEKQGSSKLEKAEVLQMTVDHLKMLHATGGTGFFDARALAVDFRSIGFRECLTEVIRYLGVLEGPSS
RADPVRIRLLSHLNSYAAEMEPSPTPTGPLAFPAWPWSFFHSCPGLPALSNQLAILGRVPSPVLPGVSSP
AYPIPALRTAPLRRATGIILPARRNVLPSRGASSTRRARPLERPATPVPVAPSSRAARSSHIAPLLQSSS
PTPPGPTGSAAYVAVPTPNSSSPGPAGRPAGAMLYHSWVSEITEIGAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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