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Report for CCDS44766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44766.1 Public Homo sapiens 11 DDX25 24 110 108 CCDS HistoryNCBI Gene:29118Re-query CCDS DB by CCDS ID:44766.1Re-query CCDS DB by GeneID:29118See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44766.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263576.11 ENSP00000263576.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263576.11Link to Ensembl Protein Viewer:ENSP00000263576.6Re-query CCDS DB by Nucleotide ID:ENST00000263576Re-query CCDS DB by Protein ID:ENSP00000263576
Original member Current member NCBI NM_013264.5 NP_037396.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013264.5Link to Protein Sequence:NP_037396.3Re-query CCDS DB by Nucleotide ID:NM_013264Re-query CCDS DB by Protein ID:NP_037396Link to BLAST:NP_037396.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037396.3 483 Q9UHL0-1 483 100% 0 0

Chromosomal Locations for CCDS 44766.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 125904518 125904580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125905212 125905278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125905553 125905597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125906074 125906209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125908196 125908288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125908401 125908503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125910364 125910478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125911311 125911488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125917014 125917251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125918628 125918790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125921191 125921379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 125922820 125922881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1452 nt):
ATGGCGTCGTTACTGTGGGGAGGCGACGCAGGGGCGGCGGAGAGCGAGCGGCTGAACAGCCACTTTTCAA
ACCTCAGCCAACCCCGGAAGAACCTTTGGGGTATTAAGAGTACTGCAGTCCGAAACATAGATGGTTCTAT
TAATAACATCAATGAAGATGATGAAGAAGATGTAGTGGATTTGGCAGCTAATTCACTCTTAAACAAGTTA
ATCCATCAATCCTTAGTAGAATCCAGTCACCGTGTGGAAGTTTTACAGAAGGATCCCAGCTCTCCACTTT
ACTCAGTAAAGACATTTGAAGAGCTGCGGCTAAAGGAAGAGTTACTAAAAGGAATCTATGCAATGGGATT
TAATAGGCCATCTAAAATCCAAGAGATGGCTCTCCCTATGATGCTGGCACATCCACCCCAGAACCTCATA
GCACAGAGCCAGTCTGGAACAGGAAAGACAGCGGCATTTGTGTTGGCAATGTTAAGCAGAGTTAATGCCT
TGGAATTGTTCCCACAGTGCCTCTGCCTAGCTCCTACTTATGAATTGGCTCTGCAAACTGGCCGTGTGGT
TGAGCAGATGGGAAAATTCTGTGTGGATGTTCAAGTGATGTATGCCATTCGAGGGAATCGAATTCCCAGA
GGCACCGACATCACTAAACAGATTATAATTGGCACTCCTGGGACTGTCCTAGATTGGTGTTTTAAACTAA
AATTGATTGATTTGACTAAGATTCGTGTGTTTGTCCTGGATGAAGCAGATGTGATGATTGACACTCAAGG
ATTCTCAGATCATAGTATTCGTATTCAAAGAGCTCTACCCTCCGAATGCCAAATGCTCCTCTTTTCAGCA
ACCTTTGAGGACTCTGTGTGGCACTTTGCTGAGCGAATCATCCCTGACCCTAATGTTATCAAGTTACGCA
AAGAGGAGCTCACACTGAACAACATCCGGCAATATTACGTGCTGTGTGAGCACAGGAAAGACAAATACCA
AGCTCTGTGCAACATTTATGGCAGCATCACCATTGGTCAGGCCATCATCTTCTGCCAGACTCGTCGAAAC
GCTAAGTGGTTGACCGTGGAGATGATACAGGATGGCCACCAGGTGTCTTTGTTAAGCGGGGAGCTGACCG
TGGAGCAGCGAGCTTCCATCATTCAGAGGTTTCGGGATGGGAAAGAGAAGGTTCTCATAACAACTAATGT
TTGTGCCCGAGGGATTGATGTGAAGCAGGTCACAATTGTTGTGAACTTTGATCTCCCTGTAAAACAAGGA
GAGGAGCCGGACTATGAGACCTACCTCCACCGCATAGGGCGGACGGGGCGCTTTGGGAAAAAAGGCCTTG
CCTTCAACATGATTGAAGTAGATGAGCTGCCCTCGCTCATGAAAATCCAGGACCACTTTAACAGCAGTAT
TAAGCAACTCAACGCTGAAGACATGGATGAAATTGAAAAGATTGACTATTGA

Translation (483 aa):
MASLLWGGDAGAAESERLNSHFSNLSQPRKNLWGIKSTAVRNIDGSINNINEDDEEDVVDLAANSLLNKL
IHQSLVESSHRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLI
AQSQSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPR
GTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSECQMLLFSA
TFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAIIFCQTRRN
AKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQG
EEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQLNAEDMDEIEKIDY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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