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Report for CCDS55469.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55469.1 Public Homo sapiens X PWWP3B 24 110 108 CCDS HistoryNCBI Gene:139221Re-query CCDS DB by CCDS ID:55469.1Re-query CCDS DB by GeneID:139221See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55469.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337685.6 ENSP00000338641.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337685.6Link to Ensembl Protein Viewer:ENSP00000338641.2Re-query CCDS DB by Nucleotide ID:ENST00000337685Re-query CCDS DB by Protein ID:ENSP00000338641
Original member Current member EBI ENST00000357175.6 ENSP00000349699.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357175.6Link to Ensembl Protein Viewer:ENSP00000349699.2Re-query CCDS DB by Nucleotide ID:ENST00000357175Re-query CCDS DB by Protein ID:ENSP00000349699
Original member Current member EBI ENST00000372552.1 ENSP00000361632.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372552.1Link to Ensembl Protein Viewer:ENSP00000361632.1Re-query CCDS DB by Nucleotide ID:ENST00000372552Re-query CCDS DB by Protein ID:ENSP00000361632
Original member Current member NCBI NM_001171020.2 NP_001164491.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001171020.2Link to Protein Sequence:NP_001164491.1Re-query CCDS DB by Nucleotide ID:NM_001171020Re-query CCDS DB by Protein ID:NP_001164491Link to BLAST:NP_001164491.1
Original member Current member NCBI NM_152423.5 NP_689636.3 Accepted alive Link to Nucleotide Sequence:NM_152423.5Link to Protein Sequence:NP_689636.3Re-query CCDS DB by Nucleotide ID:NM_152423Re-query CCDS DB by Protein ID:NP_689636Link to BLAST:NP_689636.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164491.1 696 Q5H9M0 696 100% 0 0
NP_689636.3 696 Q5H9M0 696 100% 0 0

Chromosomal Locations for CCDS 55469.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 106205433 106207523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2091 nt):
ATGGAGTCTGAGTATGTCCTATGCAACTGGAAAGACCAGTTGTGGCCAGCAAAAGTTTTGTCCAGATCTG
AA
ACTTCATCAAACAGTAAGAGGAAAAAGGCATTTTCTCTAGAAGTTCAAATACTCTCACTAGATGAAAA
A
ATTAAATTGGACAGCACAGAAACAAAGATCCTAAATAAATCTCAAATTGAAGCCATTGCTGCCTCATTA
GGA
CTACAGTCAGAGGACAGTGCTCCACCTACAGAGGAAACTGCCTATGGAAGATCACTAAAAGTGGCAC
TG
GGTATTCTGAATGAGAGAACAAATTTGAGTCAAGCAAGCACTTCAGATGAAGAGGAGATCACTATGCT
G
TCTCAAAATGTACCACAAAAACAGTCCGATTCACCCCCTCATAAAAAATACCGGAAGGATGAAGGTGAC
TTA
CCAGGGTGTCTTGAGGAAAGGGAAAACTCAGCATGCTTGTTAGCATCTTCAGAGAGTGATGATTCCC
TG
TATGATGATAAATCACAAGCACCCACAATGGTCGATACTATTCCAAGTGAAGTGGAAACAAAGTCATT
A
CAAAACTCTAGCTGGTGCGAGACTTTCCCTTCACTTTCGGAAGATAATGATGAAAAAGAGAACAAGAAT
AAG
ATTGATATCTCAGCAGTTATGTCTGTGCATTCTGCAGTCAAAGAGGAAAGTGCATGTGTTAAAGATG
AA
AAGTTTGCTCCACCTTTGTCACCTTTGTCATCAGATATGCTCATTATGCCCAAAGCTTTGAAAGAAGA
G
AGCGAGGATACCTGCCTAGAGACCCTGGCTGTTCCCTCTGAATGCTCTGCTTTCTCAGAGAATATTGAG
GAT
CCTGGAGAGGGTCCCTCAAATCCATGCTTAGATACCAGCCAGAATCAACCTTCCATGGAATCAGAGA
TG
GGGGCTGCAGCATGCCCTGGGAGTTGTTCAAGGGAATGCGAGGTTTCATTTAGTGCCTCTAACCCTGT
C
TGGGATTATTCACATCTTATGAGTAGTGAAAGAAATTTTCAGAGACTGGATTTTGAAGAACTTGAGGAA
GAA
GGTCAAGCCTCTGACAAGTCATTGCTTCCAAGTCGCATTAATCTTTCTCTATTAGATGATGATGAGG
AA
GACGAAGAACTTCCACGCTTCATTTTACATTATGAGACACATCCGTTTGAAACAGGAATGATAGTCTG
G
TTTAAATATCAGAAATATCCATTTTGGCCAGCAGTGATAAAAAGTATCAGACGAAAAGAGAGGAAAGCA
AGT
GTGCTTTTTGTTGAGGCAAACATGAATTCTGAAAAGAAGGGCATTAGAGTAAATTTTAGAAGATTAA
AG
AAATTTGATTGTAAAGAGAAACAAATGCTAGTGGACAAAGCCAGGGAGGATTATAGTGAGAGTATTGA
C
TGGTGCATCTCACTAATTTGTGACTACAGAGTTAGAATAGGTTGTGGTTCTTTCACGGGCTCTTTGCTT
GAG
TATTATGCTGCTGATATTAGTTACCCAGTTAGGAAAGAAACAAAACAGGATACTTTCAGGAACAAAT
TT
CCAAAGCTGCATAATGAAGATGCCAGGGAACCGATGGCTGTAACTTCCCAGACCAAGAAAATGTCCTT
C
CAAAAAATTCTCCCTGACCGGATGAAGGCTGCTCGGGACCGAGCCAACAAGAACCTGGTGGACTTCATT
GTG
AATGCAAAGGGAACAGAGAACCATCTTCTGGCCATTGTAAATGGCACAAAAGGATCCAGATGGCTGA
AA
TCATTTTTGAATGCAAATAGGTTCACACCCTGTATTGAAACATACTTTGAGGATGAAGATCAGTTGGA
T
GAAGTGGTGAAATATTTACAAGAAGTCTGCAATCAAATAGATCAAATAATGCCAACTTGGATAAAAGAT
GAT
AAAATTAAATTTATCCTAGAAGTTCTTCTGCCAGAAGCAATTATTTGTTCAATTTCTGCTGTTGATG
GG
TTAGATTACGAGGCAGCTGAAGCAAAGTATCTAAAAGGACCATGTCTAGGCTACAGGGAAAGAGAATT
A
TTTGATGCAAAAATAATATATGAAAAGAGACGAAAAGCACCAACAAATGAAGCTCACTAA


Translation (696 aa):
MESEYVLCNWKDQLWPAKVLSRSETSSNSKRKKAFSLEVQILSLDEKIKLDSTETKILNKSQIEAIAASL
G
LQSEDSAPPTEETAYGRSLKVALGILNERTNLSQASTSDEEEITMLSQNVPQKQSDSPPHKKYRKDEGD
L
PGCLEERENSACLLASSESDDSLYDDKSQAPTMVDTIPSEVETKSLQNSSWCETFPSLSEDNDEKENKN
K
IDISAVMSVHSAVKEESACVKDEKFAPPLSPLSSDMLIMPKALKEESEDTCLETLAVPSECSAFSENIE
D
PGEGPSNPCLDTSQNQPSMESEMGAAACPGSCSRECEVSFSASNPVWDYSHLMSSERNFQRLDFEELEE
E
GQASDKSLLPSRINLSLLDDDEEDEELPRFILHYETHPFETGMIVWFKYQKYPFWPAVIKSIRRKERKA
S
VLFVEANMNSEKKGIRVNFRRLKKFDCKEKQMLVDKAREDYSESIDWCISLICDYRVRIGCGSFTGSLL
E
YYAADISYPVRKETKQDTFRNKFPKLHNEDAREPMAVTSQTKKMSFQKILPDRMKAARDRANKNLVDFI
V
NAKGTENHLLAIVNGTKGSRWLKSFLNANRFTPCIETYFEDEDQLDEVVKYLQEVCNQIDQIMPTWIKD
D
KIKFILEVLLPEAIICSISAVDGLDYEAAEAKYLKGPCLGYRERELFDAKIIYEKRRKAPTNEAH




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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