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Report for CCDS42664.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42664.1 Public Homo sapiens 2 TMEM214 24 110 108 CCDS HistoryNCBI Gene:54867Re-query CCDS DB by CCDS ID:42664.1Re-query CCDS DB by GeneID:54867See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42664.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000238788.14 ENSP00000238788.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000238788.14Link to Ensembl Protein Viewer:ENSP00000238788.9Re-query CCDS DB by Nucleotide ID:ENST00000238788Re-query CCDS DB by Protein ID:ENSP00000238788
Original member Current member EBI ENST00000321326.11 ENSP00000319469.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321326.11Link to Ensembl Protein Viewer:ENSP00000319469.7Re-query CCDS DB by Nucleotide ID:ENST00000321326Re-query CCDS DB by Protein ID:ENSP00000319469
Original member Current member NCBI NM_017727.5 NP_060197.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017727.5Link to Protein Sequence:NP_060197.4Re-query CCDS DB by Nucleotide ID:NM_017727Re-query CCDS DB by Protein ID:NP_060197Link to BLAST:NP_060197.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060197.4 689 Q6NUQ4-1 689 100% 0 0

Chromosomal Locations for CCDS 42664.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27033016 27033166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27034067 27034266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27035135 27035285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27035594 27035728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27035970 27036052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27036487 27036592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27036705 27036786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27037077 27037178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27037561 27037702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27038146 27038237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27038484 27038532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27038702 27038815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27039047 27039164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27039741 27039837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27040030 27040198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27040345 27040496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27040711 27040837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2070 nt):
ATGGCGACCAAGACGGCGGGCGTGGGGCGGTGGGAGGTAGTGAAGAAGGGTCGGCGGCCTGGGGTCGGCG
CCGGCGCCGGCGGCCGAGGAGGCGGCAGGAACCGCAGGGCGCTCGGGGAAGCAAACGGAGTGTGGAAATA
CGACCTGACCCCTGCAATCCAGACCACAAGCACCCTTTATGAGCGGGGCTTTGAGAATATCATGAAGCGG
CAGAATAAGGAGCAGGTCCCACCCCCTGCTGTGGAACCTAAGAAACCAGGGAACAAGAAGCAGCCAAAGA
AGGTGGCAACTCCTCCCAACCAAAACCAGAAGCAGGGCCGCTTCCGCAGCCTGGAGGAAGCACTGAAAGC
TCTGGATGTGGCAGACCTGCAGAAGGAACTGGACAAGAGCCAGAGTGTGTTCTCTGGAAACCCATCCATA
TGGTTGAAGGACCTGGCCAGCTATCTCAACTACAAGCTACAAGCTCCTCTAAGTGAACCCACGCTGAGCC
AGCATACTCATGATTATCCCTACAGCCTGGTGAGCCGGGAGCTACGTGGGATCATCCGAGGGCTGCTGGC
GAAGGCAGCAGGGTCTCTGGAGCTCTTTTTTGACCACTGTCTGTTCACCATGTTGCAAGAGCTGGATAAG
ACACCAGGGGAGTCACTACATGGTTACCGCATCTGTATCCAGGCCATCCTGCAAGACAAGCCCAAGATTG
CCACGGCAAACCTAGGCAAGTTCCTGGAACTGCTGAGGTCCCACCAGAGCCGACCAGCAAAGTGTCTCAC
CATCATGTGGGCCCTGGGTCAAGCAGGTTTTGCCAACCTCACCGAGGGACTGAAAGTGTGGCTGGGGATC
ATGCTGCCTGTGCTGGGCATCAAGTCTCTGTCTCCCTTTGCCATCACATACCTGGATCGGCTGCTCCTGA
TGCATCCCAACCTTACCAAGGGCTTCGGCATGATTGGCCCCAAGGACTTCTTCCCACTTCTGGACTTTGC
CTATATGCCGAACAACTCCCTGACACCCAGCCTGCAGGAGCAGCTGTGTCAGCTCTACCCCCGACTGAAA
GTGCTGGCATTTGGAGCAAAGCCGGATTCCACCCTGCATACCTACTTCCCTTCTTTCCTGTCCAGAGCCA
CCCCTAGCTGTCCCCCTGAGATGAAGAAAGAGCTCCTGAGCAGCCTGACTGAGTGCCTGACGGTGGACCC
CCTCAGTGCCAGCGTCTGGAGGCAGCTGTACCCTAAGCACCTGTCACAGTCCAGCCTTCTGCTGGAGCAC
TTGCTCAGCTCCTGGGAGCAGATTCCCAAGAAGGTACAGAAGTCTTTGCAAGAAACCATTCAGTCCCTCA
AGCTTACCAACCAGGAGCTGCTGAGGAAGGGTAGCAGTAACAACCAGGATGTCGTCACCTGTGACATGGC
CTGCAAGGGCCTGTTGCAGCAGGTTCAGGGTCCTCGGCTGCCCTGGACGCGGCTCCTCCTGTTGCTGCTG
GTCTTCGCTGTAGGCTTCCTGTGCCATGACCTCCGGTCACACAGCTCCTTCCAGGCCTCCCTTACTGGCC
GGTTGCTTCGATCATCTGGCTTCTTACCTGCTAGCCAACAAGCGTGTGCCAAGCTCTACTCCTACAGTCT
GCAAGGCTACAGCTGGCTGGGGGAGACACTGCCGCTCTGGGGCTCCCACCTGCTCACCGTGGTGCGGCCC
AGCTTGCAGCTGGCCTGGGCTCACACCAATGCCACAGTCAGCTTCCTTTCTGCCCACTGTGCCTCTCACC
TTGCGTGGTTTGGTGACAGTCTCACCAGTCTCTCTCAGAGGCTACAGATCCAGCTCCCCGATTCCGTGAA
TCAGCTACTCCGCTATCTGAGAGAGCTGCCCCTGCTTTTCCACCAGAATGTGCTGCTGCCACTGTGGCAC
CTCTTGCTTGAGGCCCTGGCCTGGGCCCAGGAGCACTGCCATGAGGCATGCAGAGGTGAGGTGACCTGGG
ACTGCATGAAGACACAGCTCAGTGAGGCTGTCCACTGGACCTGGCTTTGCCTACAGGACATTACAGTGGC
TTTCTTGGACTGGGCACTTGCCCTGATATCCCAGCAGTAG

Translation (689 aa):
MATKTAGVGRWEVVKKGRRPGVGAGAGGRGGGRNRRALGEANGVWKYDLTPAIQTTSTLYERGFENIMKR
QNKEQVPPPAVEPKKPGNKKQPKKVATPPNQNQKQGRFRSLEEALKALDVADLQKELDKSQSVFSGNPSI
WLKDLASYLNYKLQAPLSEPTLSQHTHDYPYSLVSRELRGIIRGLLAKAAGSLELFFDHCLFTMLQELDK
TPGESLHGYRICIQAILQDKPKIATANLGKFLELLRSHQSRPAKCLTIMWALGQAGFANLTEGLKVWLGI
MLPVLGIKSLSPFAITYLDRLLLMHPNLTKGFGMIGPKDFFPLLDFAYMPNNSLTPSLQEQLCQLYPRLK
VLAFGAKPDSTLHTYFPSFLSRATPSCPPEMKKELLSSLTECLTVDPLSASVWRQLYPKHLSQSSLLLEH
LLSSWEQIPKKVQKSLQETIQSLKLTNQELLRKGSSNNQDVVTCDMACKGLLQQVQGPRLPWTRLLLLLL
VFAVGFLCHDLRSHSSFQASLTGRLLRSSGFLPASQQACAKLYSYSLQGYSWLGETLPLWGSHLLTVVRP
SLQLAWAHTNATVSFLSAHCASHLAWFGDSLTSLSQRLQIQLPDSVNQLLRYLRELPLLFHQNVLLPLWH
LLLEALAWAQEHCHEACRGEVTWDCMKTQLSEAVHWTWLCLQDITVAFLDWALALISQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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