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Report for CCDS13233.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13233.1 Public Homo sapiens 20 AHCY 24 110 108 CCDS HistoryNCBI Gene:191Re-query CCDS DB by CCDS ID:13233.1Re-query CCDS DB by GeneID:191See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13233.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000217426.7 ENSP00000217426.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000217426.7Link to Ensembl Protein Viewer:ENSP00000217426.2Re-query CCDS DB by Nucleotide ID:ENST00000217426Re-query CCDS DB by Protein ID:ENSP00000217426
Original member Current member NCBI NM_000687.4 NP_000678.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000687.4Link to Protein Sequence:NP_000678.1Re-query CCDS DB by Nucleotide ID:NM_000687Re-query CCDS DB by Protein ID:NP_000678Link to BLAST:NP_000678.1
Original member Current member NCBI NM_001362750.2 NP_001349679.1 Accepted alive Link to Nucleotide Sequence:NM_001362750.2Link to Protein Sequence:NP_001349679.1Re-query CCDS DB by Nucleotide ID:NM_001362750Re-query CCDS DB by Protein ID:NP_001349679Link to BLAST:NP_001349679.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000678.1 432 P23526-1 432 100% 0 0
NP_001349679.1 432 P23526-1 432 100% 0 0

Chromosomal Locations for CCDS 13233.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 34281034 34281165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34285440 34285634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34290332 34290449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34290551 34290638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34290731 34290938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34291419 34291531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34292358 34292507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34294081 34294156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34295395 34295585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34303243 34303270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1299 nt):
ATGTCTGACAAACTGCCCTACAAAGTCGCCGACATCGGCCTGGCTGCCTGGGGACGCAAGGCCCTGGACA
TTGCTGAGAACGAGATGCCGGGCCTGATGCGTATGCGGGAGCGGTACTCGGCCTCCAAGCCACTGAAGGG
CGCCCGCATCGCTGGCTGCCTGCACATGACCGTGGAGACGGCCGTCCTCATTGAGACCCTCGTCACCCTG
GGTGCTGAGGTGCAGTGGTCCAGCTGCAACATCTTCTCCACCCAGGACCATGCGGCGGCTGCCATTGCCA
AGGCTGGCATTCCGGTGTATGCCTGGAAGGGCGAAACGGACGAGGAGTACCTGTGGTGCATTGAGCAGAC
CCTGTACTTCAAGGACGGGCCCCTCAACATGATTCTGGACGACGGGGGCGACCTCACCAACCTCATCCAC
ACCAAGTACCCGCAGCTTCTGCCAGGCATCCGAGGCATCTCTGAGGAGACCACGACTGGGGTCCACAACC
TCTACAAGATGATGGCCAATGGGATCCTCAAGGTGCCTGCCATCAATGTCAATGACTCCGTCACCAAGAG
CAAGTTTGACAACCTCTATGGCTGCCGGGAGTCCCTCATAGATGGCATCAAGCGGGCCACAGATGTGATG
ATTGCCGGCAAGGTAGCGGTGGTAGCAGGCTATGGTGATGTGGGCAAGGGCTGTGCCCAGGCCCTGCGGG
GTTTCGGAGCCCGCGTCATCATCACCGAGATTGACCCCATCAACGCACTGCAGGCTGCCATGGAGGGCTA
TGAGGTGACCACCATGGATGAGGCCTGTCAGGAGGGCAACATCTTTGTCACCACCACAGGCTGTATTGAC
ATCATCCTTGGCCGGCACTTTGAGCAGATGAAGGATGATGCCATTGTGTGTAACATTGGACACTTTGACG
TGGAGATCGATGTCAAGTGGCTCAACGAGAACGCCGTGGAGAAGGTGAACATCAAGCCGCAGGTGGACCG
GTATCGGTTGAAGAATGGGCGCCGCATCATCCTGCTGGCCGAGGGTCGGCTGGTCAACCTGGGTTGTGCC
ATGGGCCACCCCAGCTTCGTGATGAGTAACTCCTTCACCAACCAGGTGATGGCGCAGATCGAGCTGTGGA
CCCATCCAGACAAGTACCCCGTTGGGGTTCATTTCCTGCCCAAGAAGCTGGATGAGGCAGTGGCTGAAGC
CCACCTGGGCAAGCTGAATGTGAAGTTGACCAAGCTAACTGAGAAGCAAGCCCAGTACCTGGGCATGTCC
TGTGATGGCCCCTTCAAGCCGGATCACTACCGCTACTGA

Translation (432 aa):
MSDKLPYKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTL
GAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIH
TKYPQLLPGIRGISEETTTGVHNLYKMMANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVM
IAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTTTGCID
IILGRHFEQMKDDAIVCNIGHFDVEIDVKWLNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCA
MGHPSFVMSNSFTNQVMAQIELWTHPDKYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMS
CDGPFKPDHYRY


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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