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Report for CCDS14786.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14786.1 Public Homo sapiens Y TMSB4Y 24 110 108 CCDS HistoryNCBI Gene:9087Re-query CCDS DB by CCDS ID:14786.1Re-query CCDS DB by GeneID:9087See the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14786.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000284856.4 ENSP00000284856.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000284856.4Link to Ensembl Protein Viewer:ENSP00000284856.3Re-query CCDS DB by Nucleotide ID:ENST00000284856Re-query CCDS DB by Protein ID:ENSP00000284856
Original member Current member NCBI NM_004202.3 NP_004193.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004202.3Link to Protein Sequence:NP_004193.1Re-query CCDS DB by Nucleotide ID:NM_004202Re-query CCDS DB by Protein ID:NP_004193Link to BLAST:NP_004193.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004193.1 44 O14604 44 100% 0 0

Chromosomal Locations for CCDS 14786.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
Y 13704336 13704435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 13705225 13705259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (135 nt):
ATGTCTGACAAACCTGGTATGGCTGAGATCGAGAAATTCGATAAGTCGAAACTGAAGAAGACAGAAACGC
AAGAGAAGAATCCATTGTCTTCCAAAGAAACTATCGAACAGGAGAGGCAAGCAGGCGAATCTTAA

Translation (44 aa):
MSDKPGMAEIEKFDKSKLKKTETQEKNPLSSKETIEQERQAGES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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