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Report for CCDS14043.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14043.1 Public Homo sapiens 22 TTLL1 24 110 108 CCDS HistoryNCBI Gene:25809Re-query CCDS DB by CCDS ID:14043.1Re-query CCDS DB by GeneID:25809See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14043.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266254.12 ENSP00000266254.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266254.12Link to Ensembl Protein Viewer:ENSP00000266254.7Re-query CCDS DB by Nucleotide ID:ENST00000266254Re-query CCDS DB by Protein ID:ENSP00000266254
Original member Current member NCBI NM_012263.5 NP_036395.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012263.5Link to Protein Sequence:NP_036395.1Re-query CCDS DB by Nucleotide ID:NM_012263Re-query CCDS DB by Protein ID:NP_036395Link to BLAST:NP_036395.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036395.1 423 O95922-1 423 100% 0 0

Chromosomal Locations for CCDS 14043.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 43039776 43039905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43046410 43046573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43051801 43051887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43059384 43059527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43063813 43063921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43064190 43064324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43068410 43068590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43069636 43069844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 43075474 43075586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGGCAGGGAAAGTAAAATGGGTCACTGATATCGAGAAGTCAGTGCTGATCAATAACTTTGAAAAGAGAG
GATGGGTCCAAGTGACAGAAAACGAGGACTGGAATTTTTACTGGATGAGTGTGCAAACCATCCGAAATGT
GTTCAGCGTTGAAGCTGGATATCGGCTCTCAGATGACCAAATAGTCAACCATTTTCCAAACCACTATGAA
CTGACCCGGAAGGACCTGATGGTGAAGAACATCAAAAGATACAGGAAGGAGCTGGAGAAAGAAGGGAGTC
CTCTGGCAGAAAAAGATGAAAATGGAAAATACCTCTATCTGGACTTTGTTCCAGTCACCTATATGCTGCC
CGCTGACTACAACCTGTTTGTAGAGGAGTTCCGGAAGAGCCCGTCCAGCACCTGGATCATGAAGCCTTGT
GGCAAGGCCCAGGGAAAGGGCATCTTCCTTATCAACAAGCTCTCACAGATCAAAAAGTGGTCCCGGGACA
GCAAGACATCTTCGTTTGTGTCTCAATCTAATAAGGAAGCCTACGTGATCTCTCTCTATATTAACAACCC
GTTACTAATTGGCGGGAGGAAGTTCGACCTGCGCTTGTACGTTCTGGTGTCCACGTACCGTCCACTGCGC
TGTTACATGTACAAGCTTGGGTTTTGCCGGTTCTGCACAGTGAAATACACCCCGAGTACCAGTGAGCTGG
ACAACATGTTCGTTCATCTCACCAACGTCGCCATCCAGAAACACGGGGAGGACTACAACCACATCCATGG
GGGCAAGTGGACAGTGAGTAACCTGCGGCTCTACCTGGAGAGCACCCGCGGCAAGGAGGTGACCAGCAAG
CTGTTCGACGAGATCCACTGGATCATCGTGCAGTCCCTGAAGGCTGTGGCGCCGGTGATGAACAATGACA
AGCACTGCTTTGAATGCTATGGCTACGACATCATCATCGACGACAAGCTGAAGCCCTGGCTGATCGAGGT
GAATGCGTCCCCGTCTCTCACGTCCAGCACTGCCAATGACCGAATCCTCAAGTACAACCTGATTAATGAC
ACCCTCAACATCGCCGTCCCGAATGGTGAAATCCCAGACTGCAAATGGAACAAGTCGCCACCTAAGGAAG
TCCTCGGCAATTACGAGATTCTGTATGATGAAGAATTGGCCCAGGGTGACGGGGCTGACCGGGAGCTGAG
AAGCCGTCAGGGTCAGTCTCTGGGGCCCAGAGCAGGCCGATCGAGAGACTCGGGGAGAGCGGTCCTCACC
ACCTGGAAGTGA

Translation (423 aa):
MAGKVKWVTDIEKSVLINNFEKRGWVQVTENEDWNFYWMSVQTIRNVFSVEAGYRLSDDQIVNHFPNHYE
LTRKDLMVKNIKRYRKELEKEGSPLAEKDENGKYLYLDFVPVTYMLPADYNLFVEEFRKSPSSTWIMKPC
GKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSNKEAYVISLYINNPLLIGGRKFDLRLYVLVSTYRPLR
CYMYKLGFCRFCTVKYTPSTSELDNMFVHLTNVAIQKHGEDYNHIHGGKWTVSNLRLYLESTRGKEVTSK
LFDEIHWIIVQSLKAVAPVMNNDKHCFECYGYDIIIDDKLKPWLIEVNASPSLTSSTANDRILKYNLIND
TLNIAVPNGEIPDCKWNKSPPKEVLGNYEILYDEELAQGDGADRELRSRQGQSLGPRAGRSRDSGRAVLT
TWK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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