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Report for CCDS321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
321.1 Public Homo sapiens 1 SESN2 24 110 108 CCDS HistoryNCBI Gene:83667Re-query CCDS DB by CCDS ID:321.1Re-query CCDS DB by GeneID:83667See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 321.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253063.4 ENSP00000253063.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253063.4Link to Ensembl Protein Viewer:ENSP00000253063.3Re-query CCDS DB by Nucleotide ID:ENST00000253063Re-query CCDS DB by Protein ID:ENSP00000253063
Original member Current member NCBI NM_031459.5 NP_113647.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031459.5Link to Protein Sequence:NP_113647.1Re-query CCDS DB by Nucleotide ID:NM_031459Re-query CCDS DB by Protein ID:NP_113647Link to BLAST:NP_113647.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_113647.1 480 P58004 480 100% 0 0

Chromosomal Locations for CCDS 321.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 28259848 28259937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28269183 28269248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28271674 28271871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28272284 28272466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28272581 28272793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28273358 28273508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28274040 28274158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28274825 28275015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28279097 28279241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28280716 28280802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1443 nt):
ATGATCGTGGCGGACTCCGAGTGCCGCGCAGAGCTCAAGGACTACCTGCGGTTCGCCCCGGGCGGCGTCG
GCGACTCGGGCCCCGGAGAGGAGCAGAGGGAGAGCCGGGCTCGGCGAGGCCCTCGAGGGCCCAGCGCCTT
CATCCCCGTGGAGGAGGTCCTTCGGGAGGGGGCTGAGAGCCTCGAGCAGCACCTGGGGCTGGAGGCACTG
ATGTCCTCTGGGCGAGTAGACAACCTGGCAGTGGTGATGGGCCTGCACCCTGACTACTTTACCAGCTTCT
GGCGCCTGCACTACCTGCTGCTGCACACGGATGGTCCCTTGGCCAGCTCCTGGCGCCACTACATTGCCAT
CATGGCTGCCGCCCGCCATCAGTGTTCTTACCTGGTAGGCTCCCACATGGCCGAGTTTCTGCAGACTGGT
GGTGACCCTGAGTGGCTGCTGGGCCTCCACCGGGCCCCCGAGAAGCTGCGCAAACTCAGCGAGATCAACA
AGTTGCTGGCGCATCGGCCATGGCTCATCACCAAGGAACACATCCAGGCCTTGCTGAAGACCGGCGAGCA
CACTTGGTCCCTGGCCGAGCTCATTCAGGCTCTGGTCCTGCTCACCCACTGCCACTCGCTCTCCTCCTTC
GTGTTTGGCTGTGGCATCCTCCCTGAGGGGGATGCAGATGGCAGCCCTGCCCCCCAGGCACCTACACCCC
CTAGTGAACAGAGCAGCCCCCCAAGCAGGGACCCGTTGAACAACTCTGGGGGCTTTGAGTCTGCCCGCGA
CGTGGAGGCGCTGATGGAGCGCATGCAGCAGCTGCAGGAGAGCCTGCTGCGGGATGAGGGGACGTCCCAG
GAGGAGATGGAGAGCCGCTTTGAGCTGGAGAAGTCAGAGAGCCTGCTGGTGACCCCCTCAGCTGACATCC
TGGAGCCCTCTCCACACCCAGACATGCTGTGCTTTGTGGAAGACCCTACTTTCGGATATGAGGACTTCAC
TCGGAGAGGGGCTCAGGCACCCCCTACCTTCCGGGCCCAGGATTATACCTGGGAAGACCATGGCTACTCG
CTGATCCAGCGGCTTTACCCTGAGGGTGGGCAGCTGCTGGATGAGAAGTTCCAGGCAGCCTATAGCCTCA
CCTACAATACCATCGCCATGCACAGTGGTGTGGACACCTCCGTGCTCCGCAGGGCCATCTGGAACTATAT
CCACTGCGTCTTTGGCATCAGATATGATGACTATGATTATGGGGAGGTGAACCAGCTCCTGGAGCGGAAC
CTCAAGGTCTATATCAAGACAGTGGCCTGCTACCCAGAGAAGACCACCCGAAGAATGTACAACCTCTTCT
GGAGGCACTTCCGCCACTCAGAGAAGGTCCACGTGAACTTGCTGCTCCTGGAGGCGCGCATGCAAGCCGC
TCTGCTGTACGCCCTCCGTGCCATCACCCGCTACATGACCTGA

Translation (480 aa):
MIVADSECRAELKDYLRFAPGGVGDSGPGEEQRESRARRGPRGPSAFIPVEEVLREGAESLEQHLGLEAL
MSSGRVDNLAVVMGLHPDYFTSFWRLHYLLLHTDGPLASSWRHYIAIMAAARHQCSYLVGSHMAEFLQTG
GDPEWLLGLHRAPEKLRKLSEINKLLAHRPWLITKEHIQALLKTGEHTWSLAELIQALVLLTHCHSLSSF
VFGCGILPEGDADGSPAPQAPTPPSEQSSPPSRDPLNNSGGFESARDVEALMERMQQLQESLLRDEGTSQ
EEMESRFELEKSESLLVTPSADILEPSPHPDMLCFVEDPTFGYEDFTRRGAQAPPTFRAQDYTWEDHGYS
LIQRLYPEGGQLLDEKFQAAYSLTYNTIAMHSGVDTSVLRRAIWNYIHCVFGIRYDDYDYGEVNQLLERN
LKVYIKTVACYPEKTTRRMYNLFWRHFRHSEKVHVNLLLLEARMQAALLYALRAITRYMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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