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Report for CCDS11474.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11474.1 Public Homo sapiens 17 TMEM101 24 110 108 CCDS HistoryNCBI Gene:84336Re-query CCDS DB by CCDS ID:11474.1Re-query CCDS DB by GeneID:84336See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11474.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000206380.8 ENSP00000206380.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000206380.8Link to Ensembl Protein Viewer:ENSP00000206380.3Re-query CCDS DB by Nucleotide ID:ENST00000206380Re-query CCDS DB by Protein ID:ENSP00000206380
Original member Current member EBI ENST00000589334.5 ENSP00000468025.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589334.5Link to Ensembl Protein Viewer:ENSP00000468025.1Re-query CCDS DB by Nucleotide ID:ENST00000589334Re-query CCDS DB by Protein ID:ENSP00000468025
Original member Current member NCBI NM_032376.4 NP_115752.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032376.4Link to Protein Sequence:NP_115752.1Re-query CCDS DB by Nucleotide ID:NM_032376Re-query CCDS DB by Protein ID:NP_115752Link to BLAST:NP_115752.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115752.1 257 Q96IK0 257 100% 0 0

Chromosomal Locations for CCDS 11474.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44011928 44012236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44013009 44013155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44014357 44014537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44014816 44014952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGGCGTCGAAGATAGGTTCGAGACGGTGGATGTTGCAGCTGATCATGCAGTTGGGTTCGGTGCTGCTCA
CACGCTGCCCCTTTTGGGGCTGCTTCAGCCAGCTCATGCTGTACGCTGAGAGGGCTGAGGCACGCCGGAA
GCCCGACATCCCAGTGCCTTACCTGTATTTCGACATGGGGGCAGCCGTGCTGTGCGCTAGTTTCATGTCC
TTTGGCGTGAAGCGGCGCTGGTTCGCGCTGGGGGCCGCACTCCAATTGGCCATTAGCACCTACGCCGCCT
ACATCGGGGGCTACGTCCACTACGGGGACTGGCTGAAGGTCCGTATGTACTCGCGCACAGTTGCCATCAT
CGGCGGCTTTCTTGTGTTGGCCAGCGGTGCTGGGGAGCTGTACCGCCGGAAACCTCGCAGCCGCTCCCTG
CAGTCCACCGGCCAGGTGTTCCTGGGTATCTACCTCATCTGTGTGGCCTACTCACTGCAGCACAGCAAGG
AGGACCGGCTGGCGTATCTGAACCATCTCCCAGGAGGGGAGCTGATGATCCAGCTGTTCTTCGTGCTGTA
TGGCATCCTGGCCCTGGCCTTTCTGTCAGGCTACTACGTGACCCTCGCTGCCCAGATCCTGGCTGTACTG
CTGCCCCCTGTCATGCTGCTCATTGATGGCAATGTTGCTTACTGGCACAACACGCGGCGTGTTGAGTTCT
GGAACCAGATGAAGCTCCTTGGAGAGAGTGTGGGCATCTTCGGAACTGCTGTCATCCTGGCCACTGATGG
CTGA

Translation (257 aa):
MASKIGSRRWMLQLIMQLGSVLLTRCPFWGCFSQLMLYAERAEARRKPDIPVPYLYFDMGAAVLCASFMS
FGVKRRWFALGAALQLAISTYAAYIGGYVHYGDWLKVRMYSRTVAIIGGFLVLASGAGELYRRKPRSRSL
QSTGQVFLGIYLICVAYSLQHSKEDRLAYLNHLPGGELMIQLFFVLYGILALAFLSGYYVTLAAQILAVL
LPPVMLLIDGNVAYWHNTRRVEFWNQMKLLGESVGIFGTAVILATDG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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