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Report for CCDS30809.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30809.1 Public Homo sapiens 1 BCL2L15 24 110 108 CCDS HistoryNCBI Gene:440603Re-query CCDS DB by CCDS ID:30809.1Re-query CCDS DB by GeneID:440603See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30809.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393316.8 ENSP00000376992.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393316.8Link to Ensembl Protein Viewer:ENSP00000376992.3Re-query CCDS DB by Nucleotide ID:ENST00000393316Re-query CCDS DB by Protein ID:ENSP00000376992
Original member Current member NCBI NM_001010922.3 NP_001010922.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010922.3Link to Protein Sequence:NP_001010922.1Re-query CCDS DB by Nucleotide ID:NM_001010922Re-query CCDS DB by Protein ID:NP_001010922Link to BLAST:NP_001010922.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010922.1 163 Q5TBC7-1 163 100% 0 0

Chromosomal Locations for CCDS 30809.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 113881123 113881140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113881773 113881997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113886537 113886658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 113887249 113887375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGAAGAGCTCCCAAACTTTTGAGGAACAAACGGAATGCATTGTGAACACTCTACTCATGGACTTCTTGA
GCCCAACATTGCAGGTTGCCAGCCGGAACCTATGCTGTGTAGATGAAGTAGATTCAGGAGAGCCTTGTTC
TTTTGATGTGGCTATCATTGCTGGTCGCCTTCGGATGTTGGGTGACCAGTTCAACGGAGAATTGGAAGCT
TCTGCCAAAAACGTCATTGCAGAAACCATTAAGGGACAGACAGGAGCTATACTCCAGGACACTGTGGAAT
CTCTCAGCAAGACCTGGTGTGCTCAGGATTCCAGCTTAGCTTATGAGAGAGCTTTTCTGGCAGTGTCAGT
GAAACTTCTTGAGTACATGGCTCACATTGCTCCTGAAGTAGTGGGACAGGTGGCTATCCCCATGACGGGT
ATGATCAATGGGAACCAAGCCATCCGGGAGTTCATCCAGGGCCAGGGAGGTTGGGAAAATCTGGAGAGCT
GA

Translation (163 aa):
MKSSQTFEEQTECIVNTLLMDFLSPTLQVASRNLCCVDEVDSGEPCSFDVAIIAGRLRMLGDQFNGELEA
SAKNVIAETIKGQTGAILQDTVESLSKTWCAQDSSLAYERAFLAVSVKLLEYMAHIAPEVVGQVAIPMTG
MINGNQAIREFIQGQGGWENLES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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