NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS9470.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9470.1 Public Homo sapiens 13 DCT 24 110 108 CCDS HistoryNCBI Gene:1638Re-query CCDS DB by CCDS ID:9470.1Re-query CCDS DB by GeneID:1638See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9470.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377028.10 ENSP00000366227.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377028.10Link to Ensembl Protein Viewer:ENSP00000366227.4Re-query CCDS DB by Nucleotide ID:ENST00000377028Re-query CCDS DB by Protein ID:ENSP00000366227
Original member Current member NCBI NM_001922.5 NP_001913.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001922.5Link to Protein Sequence:NP_001913.2Re-query CCDS DB by Nucleotide ID:NM_001922Re-query CCDS DB by Protein ID:NP_001913Link to BLAST:NP_001913.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001913.2 519 P40126-1 519 100% 0 0

Chromosomal Locations for CCDS 9470.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 94439898 94440076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 94443436 94443637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 94460091 94460226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 94462010 94462189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 94465633 94465799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 94466558 94466658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 94468746 94469045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 94478961 94479255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1560 nt):
ATGAGCCCCCTTTGGTGGGGGTTTCTGCTCAGTTGCTTGGGCTGCAAAATCCTGCCAGGAGCCCAGGGTC
AGTTCCCCCGAGTCTGCATGACGGTGGACAGCCTAGTGAACAAGGAGTGCTGCCCACGCCTGGGTGCAGA
GTCGGCCAATGTCTGTGGCTCTCAGCAAGGCCGGGGGCAGTGCACAGAGGTGCGAGCCGACACAAGGCCC
TGGAGTGGTCCCTACATCCTACGAAACCAGGATGACCGTGAGCTGTGGCCAAGAAAATTCTTCCACCGGA
CCTGCAAGTGCACAGGAAACTTTGCCGGCTATAATTGTGGAGACTGCAAGTTTGGCTGGACCGGTCCCAA
CTGCGAGCGGAAGAAACCACCAGTGATTCGGCAGAACATCCATTCCTTGAGTCCTCAGGAAAGAGAGCAG
TTCTTGGGCGCCTTAGATCTCGCGAAGAAGAGAGTACACCCCGACTACGTGATCACCACACAACACTGGC
TGGGCCTGCTTGGGCCCAATGGAACCCAGCCGCAGTTTGCCAACTGCAGTGTTTATGATTTTTTTGTGTG
GCTCCATTATTATTCTGTTAGAGATACATTATTAGGACCAGGACGCCCCTACAGGGCCATAGATTTCTCA
CATCAAGGACCTGCATTTGTTACCTGGCACCGGTACCATTTGTTGTGTCTGGAAAGAGATCTCCAGCGAC
TCATTGGCAATGAGTCTTTTGCTTTGCCCTACTGGAACTTTGCCACTGGGAGGAACGAGTGTGATGTGTG
TACAGACCAGCTGTTTGGGGCAGCGAGACCAGACGATCCGACTCTGATTAGTCGGAACTCAAGATTCTCC
AGCTGGGAAACTGTCTGTGATAGCTTGGATGACTACAACCACCTGGTCACCTTGTGCAATGGAACCTATG
AAGGTTTGCTGAGAAGAAATCAAATGGGAAGAAACAGCATGAAATTGCCAACCTTAAAAGACATACGAGA
TTGCCTGTCTCTCCAGAAGTTTGACAATCCTCCCTTCTTCCAGAACTCTACCTTCAGTTTCAGGAATGCT
TTGGAAGGGTTTGATAAAGCAGATGGGACTCTGGATTCTCAAGTGATGAGCCTTCATAATTTGGTTCATT
CCTTCCTGAACGGGACAAACGCTTTGCCACATTCAGCCGCCAATGATCCCATTTTTGTGGTTCTTCATTC
CTTTACTGATGCCATCTTTGATGAGTGGATGAAAAGATTTAATCCTCCTGCAGATGCCTGGCCTCAGGAG
CTGGCCCCTATTGGTCACAATCGGATGTACAACATGGTTCCTTTCTTCCCTCCAGTGACTAATGAAGAAC
TCTTTTTAACCTCAGACCAACTTGGCTACAGCTATGCCATCGATCTGCCAGTTTCAGTTGAAGAAACTCC
AGGTTGGCCCACAACTCTCTTAGTAGTCATGGGAACACTGGTGGCTTTGGTTGGTCTTTTTGTGCTGTTG
GCTTTTCTTCAATATAGAAGACTTCGAAAAGGATATACACCCCTAATGGAGACACATTTAAGCAGCAAGA
GATACACAGAAGAAGCCTAG

Translation (519 aa):
MSPLWWGFLLSCLGCKILPGAQGQFPRVCMTVDSLVNKECCPRLGAESANVCGSQQGRGQCTEVRADTRP
WSGPYILRNQDDRELWPRKFFHRTCKCTGNFAGYNCGDCKFGWTGPNCERKKPPVIRQNIHSLSPQEREQ
FLGALDLAKKRVHPDYVITTQHWLGLLGPNGTQPQFANCSVYDFFVWLHYYSVRDTLLGPGRPYRAIDFS
HQGPAFVTWHRYHLLCLERDLQRLIGNESFALPYWNFATGRNECDVCTDQLFGAARPDDPTLISRNSRFS
SWETVCDSLDDYNHLVTLCNGTYEGLLRRNQMGRNSMKLPTLKDIRDCLSLQKFDNPPFFQNSTFSFRNA
LEGFDKADGTLDSQVMSLHNLVHSFLNGTNALPHSAANDPIFVVLHSFTDAIFDEWMKRFNPPADAWPQE
LAPIGHNRMYNMVPFFPPVTNEELFLTSDQLGYSYAIDLPVSVEETPGWPTTLLVVMGTLVALVGLFVLL
AFLQYRRLRKGYTPLMETHLSSKRYTEEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH