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Report for CCDS44004.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44004.1 Public Homo sapiens X MAP7D3 24 110 108 CCDS HistoryNCBI Gene:79649Re-query CCDS DB by CCDS ID:44004.1Re-query CCDS DB by GeneID:79649See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44004.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316077.14 ENSP00000318086.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316077.14Link to Ensembl Protein Viewer:ENSP00000318086.9Re-query CCDS DB by Nucleotide ID:ENST00000316077Re-query CCDS DB by Protein ID:ENSP00000318086
Original member Current member NCBI NM_024597.4 NP_078873.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024597.4Link to Protein Sequence:NP_078873.2Re-query CCDS DB by Nucleotide ID:NM_024597Re-query CCDS DB by Protein ID:NP_078873Link to BLAST:NP_078873.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078873.2 876 Q8IWC1-1 876 100% 0 0

Chromosomal Locations for CCDS 44004.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136219430 136219495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136219593 136219671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136220765 136220963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136222393 136222486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136224827 136224880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136225909 136226013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136227284 136227431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136228623 136228758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136230385 136230593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136230839 136230966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136231544 136232220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136236244 136236339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136240382 136240486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136241160 136241277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136244632 136244795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136246065 136246148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136246243 136246341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136251289 136251358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2631 nt):
ATGATGGCGGACGGCGCCGCAGCTGGCGCTGGCGGCAGCCCATCCTTGAGAGAGCTGCGGGCACGGATGG
TTGCTGCAGCAAACGAGATTGCTAAGGAAAGGAGGAAGCAAGATGTGGTTAATCGTGTTGCAACCCATTC
CTCAAATATAAGATCGACATTTAAACCAGTAATCGATGGATCCATGCTTAAAAATGACATAAAACAAAGA
TTAGCAAGAGAGCGCAGAGAGGAGAAAAGGAGACAGCAAGACGCCAATAAAGAAACACAACTACTTGAAA
AAGAAAGAAAGACCAAGCTCCAATATGAAAAACAGATGGAGGAAAGACAGAGAAAGCTGAAGGAGCGAAA
AGAGAAAGAAGAACAACGGAGAATAGCTGCAGAAGAAAAAAGACACCAGAAGGATGAAGCACAAAAGGAA
AAATTTACAGCCATTCTTTATCGTACTTTGGAACGGAGGAGACTTGCTGATGATTATCAGCAAAAAAGAT
GGTCATGGGGAGGCTCTGCAATGGCGAATTCTGAGAGCAAAACTGCCAATAAACGATCTGCATCTACTGA
AAAACTTGAACAGGGTACTTCTGCTTTAATCAGACAAATGCCTTTGTCATCTGCAGGCCTTCAAAATTCC
GTTGCCAAAAGGAAAACAGACAAGGAGAGAAGCTCATCTTTAAATAGAAGAGATAGTAACCTACATTCGT
CTACTGATAAAGAACAAGCCGAAAGGAAGCCACGTGTTACAGGCGTCACCAATTATGTAATGCAGTATGT
CACTGTACCCTTGCGTAAATGTACTAGCGACGAATTGAGGGCTGTTATGTTTCCCATGTCGACAATGAAA
ATACCTCCTCAAACAAAAGTAGAAGAGTCTCCCTTGGAGAAAGTAGAGACACCTCCCAAGGCAAGTGTGG
ATGCACCCCCCCAGGTGAATGTGGAAGTATTCTGCAACACAAGCATGGAAGCGTCCCCCAAGGCAGGTGT
GGGCATGGCCCCTGAGGTGAGCACGGACTCATTCCCTGTGGTGAGCGTGGACGTGTCGCCTGTGGTGAGC
ACATATGATTCTGAGATGAGCATGGACGCATCCCCCGAGTTGAGCATAGAAGCACTCCCGAAGGTGGACC
TGGAAACAGTTCCCAAGGTGAGCATAGTAGCATCCCCGGAGGCGAGCCTGGAAGCACCCCCGGAAGTGAG
TCTGGAAGCACTGCCAGAGGTGAGCGTGGAAGCAGCCCCAGAGGGGAGCCTGGAAGCACCTCCCAAGGGG
AGCGCAGAAGTAGCCCCCAAGGAGAGTGTGAAAGGGTCACCCAAGGAGAGCATGGAGGCATCTCCTGAGG
CGATGGTGAAAGCATCCCCCAAGACATCCCTTGAAGCAAGCATGGAAGCATCTCCCAAGGCAAAAGCGAG
AGACGCTCCAAAGAAATCAGAAATGGACAAACAGGCCTTAATCCCTATTGCCAAGAAGCGTCTATCATCA
TACACTGAGTGTTATAAATGGTCATCATCTCCTGAAAATGCTTGTGGTCTGCCGTCTCCCATCAGCACTA
ACAGGCAAATCCAAAAGAACTGCCCTCCATCACCATTACCACTTATTTCAAAACAGTCACCACAGACTTC
TTTTCCTTATAAAATAATGCCTATTCAACACACCCTGTCTGTGCAAAGTGCATCAAGTACTGTCAAAAAG
AAAAAAGAAACAGTTTCTAAAACCACTAACAGATGTGAGGCTTTGAGCCAAAGGCATATGATCTATGAAG
AGTCTGGTAATAAGAGTACTGCAGGTATTATGAATGCCGAGGCGGCAACAAAAATTTTGACAGAATTGCG
CCGCCTTGCTCGTGAACAAAGAGAAAAAGAGGAAGAAGAAAGACAACGGGAAGAAATGCAGCAAAGGGTC
ATTAAGAAATCAAAAGACATGGCAAAGGAAGCAGTTGGAGGCCAAGCAGAAGACCACTTGAAACTCAAAG
ATGGGCAGCAACAAAATGAGACTAAAAAGAAGAAAGGATGGCTGGATCAGGAAGACCAGGAAGCACCACT
GCAGAAAGGGGACGCCAAAATAAAAGCTCAAGAGGAAGCTGACAAACGCAAGAAAGAACACGAGAGAATT
ATGTTACAAAATTTACAAGAACGGTTAGAAAGGAAAAAGAGAATAGAAGAAATTATGAAGCGGACAAGAA
AGACAGATGTGAATGCCTCAAAGGTCACAGAAACATCCAGCCATGACATATATGAAGAGGCTGAGGCTGA
CAACGAAGAAAGCGACAAGGACTCATTGAATGAAATGTTTCCATCAGCCATTCTAAATGGCACAGGCTCA
CCTACCAAATTTAAAATGCCGTTCAACAATGCCAAGAAAATGACACACAAGCTGGTATTTCTAGAAGATG
GTACCAGCCAGGTCCGTAAAGAGCCAAAAACATATTTTAATGGCGATTTGAAAAACTTCAGACAAAAAAG
CATGAAAGACACTTCAATACAGGAAGTAGTTTCAAGACCATCTTCCAAAAGAATGACCAGTCACACAACG
AAAACCAGAAAGGCGGATGAAACCAACACCACCAGCAGATCCTCTGCACAAACAAAATCTGAAGGATTCC
ATGACATCTTGCCAAAGTCCTCAGACACCTTTAGACAATAA

Translation (876 aa):
MMADGAAAGAGGSPSLRELRARMVAAANEIAKERRKQDVVNRVATHSSNIRSTFKPVIDGSMLKNDIKQR
LARERREEKRRQQDANKETQLLEKERKTKLQYEKQMEERQRKLKERKEKEEQRRIAAEEKRHQKDEAQKE
KFTAILYRTLERRRLADDYQQKRWSWGGSAMANSESKTANKRSASTEKLEQGTSALIRQMPLSSAGLQNS
VAKRKTDKERSSSLNRRDSNLHSSTDKEQAERKPRVTGVTNYVMQYVTVPLRKCTSDELRAVMFPMSTMK
IPPQTKVEESPLEKVETPPKASVDAPPQVNVEVFCNTSMEASPKAGVGMAPEVSTDSFPVVSVDVSPVVS
TYDSEMSMDASPELSIEALPKVDLETVPKVSIVASPEASLEAPPEVSLEALPEVSVEAAPEGSLEAPPKG
SAEVAPKESVKGSPKESMEASPEAMVKASPKTSLEASMEASPKAKARDAPKKSEMDKQALIPIAKKRLSS
YTECYKWSSSPENACGLPSPISTNRQIQKNCPPSPLPLISKQSPQTSFPYKIMPIQHTLSVQSASSTVKK
KKETVSKTTNRCEALSQRHMIYEESGNKSTAGIMNAEAATKILTELRRLAREQREKEEEERQREEMQQRV
IKKSKDMAKEAVGGQAEDHLKLKDGQQQNETKKKKGWLDQEDQEAPLQKGDAKIKAQEEADKRKKEHERI
MLQNLQERLERKKRIEEIMKRTRKTDVNASKVTETSSHDIYEEAEADNEESDKDSLNEMFPSAILNGTGS
PTKFKMPFNNAKKMTHKLVFLEDGTSQVRKEPKTYFNGDLKNFRQKSMKDTSIQEVVSRPSSKRMTSHTT
KTRKADETNTTSRSSAQTKSEGFHDILPKSSDTFRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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