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Report for CCDS14580.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14580.1 Public Homo sapiens X UBE2A 24 110 108 CCDS HistoryNCBI Gene:7319Re-query CCDS DB by CCDS ID:14580.1Re-query CCDS DB by GeneID:7319See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14580.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371558.7 ENSP00000360613.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371558.7Link to Ensembl Protein Viewer:ENSP00000360613.2Re-query CCDS DB by Nucleotide ID:ENST00000371558Re-query CCDS DB by Protein ID:ENSP00000360613
Original member Current member EBI ENST00000696534.1 ENSP00000512695.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696534.1Link to Ensembl Protein Viewer:ENSP00000512695.1Re-query CCDS DB by Nucleotide ID:ENST00000696534Re-query CCDS DB by Protein ID:ENSP00000512695
Original member Current member NCBI NM_003336.4 NP_003327.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003336.4Link to Protein Sequence:NP_003327.2Re-query CCDS DB by Nucleotide ID:NM_003336Re-query CCDS DB by Protein ID:NP_003327Link to BLAST:NP_003327.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003327.2 152 P49459-1 152 100% 0 0

Chromosomal Locations for CCDS 14580.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119574712 119574755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119574901 119574981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119575375 119575400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119581507 119581596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119582588 119582676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 119583127 119583255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGTCCACCCCGGCTCGGCGGCGCCTCATGCGGGACTTCAAGAGGTTGCAGGAGGATCCTCCAGCCGGAG
TCAGCGGGGCTCCGTCCGAGAACAACATAATGGTGTGGAACGCGGTCATTTTCGGGCCTGAAGGGACCCC
GTTTGAGGATGGAACATTTAAACTTACAATAGAATTCACTGAAGAATATCCAAATAAACCACCTACAGTT
AGATTTGTCTCTAAGATGTTCCATCCAAATGTCTATGCAGATGGTAGTATATGTCTGGACATACTTCAGA
ACCGTTGGAGTCCAACCTATGATGTGTCTTCCATTCTAACATCCATACAGTCTCTGTTGGATGAACCCAA
TCCCAATAGTCCAGCAAACAGCCAGGCTGCTCAGCTGTACCAGGAGAACAAACGGGAATATGAAAAGCGT
GTTTCTGCAATAGTAGAACAAAGCTGGCGTGATTGTTGA

Translation (152 aa):
MSTPARRRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTV
RFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKR
VSAIVEQSWRDC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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