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Report for CCDS14161.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14161.1 Public Homo sapiens X FANCB 24 110 108 CCDS HistoryNCBI Gene:2187Re-query CCDS DB by CCDS ID:14161.1Re-query CCDS DB by GeneID:2187See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14161.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324138.7 ENSP00000326819.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000324138.7Link to Ensembl Protein Viewer:ENSP00000326819.3Re-query CCDS DB by Nucleotide ID:ENST00000324138Re-query CCDS DB by Protein ID:ENSP00000326819
Original member Current member EBI ENST00000650831.1 ENSP00000498215.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000650831.1Link to Ensembl Protein Viewer:ENSP00000498215.1Re-query CCDS DB by Nucleotide ID:ENST00000650831Re-query CCDS DB by Protein ID:ENSP00000498215
Original member Current member EBI ENST00000696312.1 ENSP00000512550.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696312.1Link to Ensembl Protein Viewer:ENSP00000512550.1Re-query CCDS DB by Nucleotide ID:ENST00000696312Re-query CCDS DB by Protein ID:ENSP00000512550
Original member Current member EBI ENST00000696356.1 ENSP00000512577.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696356.1Link to Ensembl Protein Viewer:ENSP00000512577.1Re-query CCDS DB by Nucleotide ID:ENST00000696356Re-query CCDS DB by Protein ID:ENSP00000512577
Original member Current member EBI ENST00000696357.1 ENSP00000512578.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000696357.1Link to Ensembl Protein Viewer:ENSP00000512578.1Re-query CCDS DB by Nucleotide ID:ENST00000696357Re-query CCDS DB by Protein ID:ENSP00000512578
Original member Current member NCBI NM_001018113.3 NP_001018123.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001018113.3Link to Protein Sequence:NP_001018123.1Re-query CCDS DB by Nucleotide ID:NM_001018113Re-query CCDS DB by Protein ID:NP_001018123Link to BLAST:NP_001018123.1
Original member Current member NCBI NM_001324162.2 NP_001311091.1 Accepted alive Link to Nucleotide Sequence:NM_001324162.2Link to Protein Sequence:NP_001311091.1Re-query CCDS DB by Nucleotide ID:NM_001324162Re-query CCDS DB by Protein ID:NP_001311091Link to BLAST:NP_001311091.1
Original member Current member NCBI NM_152633.4 NP_689846.1 Accepted alive Link to Nucleotide Sequence:NM_152633.4Link to Protein Sequence:NP_689846.1Re-query CCDS DB by Nucleotide ID:NM_152633Re-query CCDS DB by Protein ID:NP_689846Link to BLAST:NP_689846.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018123.1 859 Q8NB91 859 100% 0 0
NP_001311091.1 859 Q8NB91 859 100% 0 0
NP_689846.1 859 Q8NB91 859 100% 0 0

Chromosomal Locations for CCDS 14161.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 14843567 14843981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14844503 14844740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14844856 14845286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14850505 14850674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14853039 14853167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14857862 14857954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14859182 14859334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 14864560 14865510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2580 nt):
ATGACTAGCAAACAAGCAATGTCATCTAACGAACAAGAAAGGCTCTTGTGTTATAATGGGGAAGTCCTTG
TTTTCCAGTTGTCTAAAGGAAATTTTGCAGATAAAGAGCCTACAAAAACACCCATATTACATGTCAGAAG
AATGGTATTTGACAGAGGAACAAAAGTATTTGTTCAGAAGTCCACTGGATTTTTTACCATAAAGGAAGAA
AACTCTCATTTAAAAATCATGTGTTGCAACTGTGTGTCAGATTTCAGAACTGGAATTAACCTCCCTTACA
TTGTGATAGAAAAAAATAAAAAGAATAATGTTTTTGAATATTTTTTACTAATCCTTCACAGTACTAATAA
ATTTGAAATGCGTTTGAGTTTTAAACTAGGCTATGAGATGAAGGATGGCCTAAGGGTCCTTAATGGCCCT
TTAATTTTATGGAGGCATGTCAAAGCATTCTTCTTTATCTCTTCTCAAACTGGCAAAGTTGTTAGTGTGT
CAGGTAACTTTTCCTCTATTCAGTGGGCAGGGGAGATTGAAAATTTAGGTATGGTTTTATTGGGACTAAA
GGAATGTTGTTTATCTGAGGAAGAATGTACTCAAGAGCCTTCAAAATCAGATTATGCAATTTGGAATACC
AAATTTTGTGTATATTCTCTTGAAAGTCAAGAAGTATTAAGTGATATATACATTATTCCTCCTGCTTACA
GCAGTGTGGTGACTTATGTACATATTTGTGCAACTGAGATCATCAAAAACCAGTTAAGAATATCTCTCAT
TGCCCTTACTCGAAAGAATCAGCTGATTTCATTTCAGAATGGAACTCCTAAAAATGTGTGCCAGCTTCCA
TTTGGAGATCCTTGTGCAGTTCAACTTATGGATTCAGGTGGAGGAAACCTCTTTTTCGTTGTATCCTTTA
TATCCAATAATGCTTGTGCTGTATGGAAAGAGAGCTTTCAGGTTGCTGCTAAATGGGAAAAACTTAGCTT
AGTACTGATAGATGACTTTATTGGAAGTGGAACTGAACAAGTACTCCTACTTTTTAAGGACTCCTTGAAC
TCAGACTGCCTGACTTCATTTAAAATAACGGATCTTGGAAAAATAAACTATTCGAGTGAACCATCAGATT
GCAATGAAGATGACTTATTTGAAGACAAACAAGAGAATCGTTACCTGGTGGTTCCACCTCTAGAAACAGG
ACTGAAAGTTTGTTTTTCTTCTTTTCGGGAATTACGGCAGCATCTGTTGCTTAAGGAAAAAATTATTTCA
AAATCTTACAAAGCTTTAATAAACCTAGTTCAAGGAAAAGATGATAATACGTCAAGTGCAGAGGAGAAGG
AATGTCTTGTTCCTCTTTGTGGTGAAGAAGAAAATTCTGTCCATATCTTAGATGAAAAGTTATCAGACAA
TTTTCAAGATTCAGAACAGCTAGTAGAGAAGATATGGTATCGTGTAATAGATGATAGCTTGGTTGTTGGA
GTGAAAACTACATCTTCTTTGAAGCTGTCCCTGAATGATGTGACTTTATCATTGTTAATGGATCAAGCCC
ATGACTCCAGATTTCGGCTTCTAAAGTGTCAAAATAGGGTGATTAAGTTGAGTACAAATCCTTTCCCAGC
ACCATACTTGATGCCATGTGAAATAGGATTGGAAGCAAAAAGGGTCACGTTGACCCCTGATAGCAAGAAA
GAGGAAAGCTTTGTTTGTGAACACCCATCTAAGAAAGAGTGTGTACAGATAATTACTGCTGTAACATCTC
TTTCACCACTTTTAACATTCAGTAAATTTTGTTGCACTGTACTGCTACAAATTATGGAGAGAGAAAGTGG
TAACTGTCCTAAAGATCGTTATGTTGTGTGTGGCAGAGTTTTTTTAAGTCTAGAAGATCTTTCAACTGGG
AAGTACCTACTGACATTTCCAAAGAAGAAACCTATAGAGCACATGGAAGATCTTTTTGCACTTCTTGCAG
CATTCCATAAATCTTGTTTTCAAATCACATCACCCGGCTATGCCCTGAATTCAATGAAGGTGTGGCTCTT
AGAACATATGAAATGTGAAATAATCAAAGAATTTCCAGAAGTGTACTTTTGTGAAAGACCGGGAAGTTTC
TATGGGACACTCTTCACTTGGAAACAGAGAACACCATTCGAAGGGATTTTAATAATCTATTCCAGGAATC
AAACAGTTATGTTCCAGTGCCTTCATAATCTCATCAGAATTCTCCCTATAAACTGTTTCCTCAAAAATCT
AAAATCAGGAAGTGAGAATTTCCTAATTGATAATATGGCATTTACTTTGGAGAAGGAACTAGTCACCCTT
AGTTCTCTTTCTTCTGCCATAGCTAAACATGAAAGCAATTTTATGCAGAGGTGTGAAGTGAGCAAAGGAA
AGAGTAGTGTCGTCGCGGCTGCTTTATCAGACAGAAGGGAAAATATCCATCCCTACAGAAAAGAACTTCA
GAGAGAAAAGAAGAAAATGTTGCAAACGAACCTAAAAGTGAGTGGTGCCCTTTACAGAGAAATAACTTTG
AAAGTAGCTGAGGTTCAGTTGAAATCAGACTTTGCTGCACAGAAACTGAGTAATTTATAA

Translation (859 aa):
MTSKQAMSSNEQERLLCYNGEVLVFQLSKGNFADKEPTKTPILHVRRMVFDRGTKVFVQKSTGFFTIKEE
NSHLKIMCCNCVSDFRTGINLPYIVIEKNKKNNVFEYFLLILHSTNKFEMRLSFKLGYEMKDGLRVLNGP
LILWRHVKAFFFISSQTGKVVSVSGNFSSIQWAGEIENLGMVLLGLKECCLSEEECTQEPSKSDYAIWNT
KFCVYSLESQEVLSDIYIIPPAYSSVVTYVHICATEIIKNQLRISLIALTRKNQLISFQNGTPKNVCQLP
FGDPCAVQLMDSGGGNLFFVVSFISNNACAVWKESFQVAAKWEKLSLVLIDDFIGSGTEQVLLLFKDSLN
SDCLTSFKITDLGKINYSSEPSDCNEDDLFEDKQENRYLVVPPLETGLKVCFSSFRELRQHLLLKEKIIS
KSYKALINLVQGKDDNTSSAEEKECLVPLCGEEENSVHILDEKLSDNFQDSEQLVEKIWYRVIDDSLVVG
VKTTSSLKLSLNDVTLSLLMDQAHDSRFRLLKCQNRVIKLSTNPFPAPYLMPCEIGLEAKRVTLTPDSKK
EESFVCEHPSKKECVQIITAVTSLSPLLTFSKFCCTVLLQIMERESGNCPKDRYVVCGRVFLSLEDLSTG
KYLLTFPKKKPIEHMEDLFALLAAFHKSCFQITSPGYALNSMKVWLLEHMKCEIIKEFPEVYFCERPGSF
YGTLFTWKQRTPFEGILIIYSRNQTVMFQCLHNLIRILPINCFLKNLKSGSENFLIDNMAFTLEKELVTL
SSLSSAIAKHESNFMQRCEVSKGKSSVVAAALSDRRENIHPYRKELQREKKKMLQTNLKVSGALYREITL
KVAEVQLKSDFAAQKLSNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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