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Report for CCDS33318.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33318.1 Public Homo sapiens 2 FASTKD1 24 110 108 CCDS HistoryNCBI Gene:79675Re-query CCDS DB by CCDS ID:33318.1Re-query CCDS DB by GeneID:79675See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33318.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453153.7 ENSP00000400513.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000453153.7Link to Ensembl Protein Viewer:ENSP00000400513.2Re-query CCDS DB by Nucleotide ID:ENST00000453153Re-query CCDS DB by Protein ID:ENSP00000400513
Original member Current member NCBI NM_001322046.2 NP_001308975.1 Accepted alive Link to Nucleotide Sequence:NM_001322046.2Link to Protein Sequence:NP_001308975.1Re-query CCDS DB by Nucleotide ID:NM_001322046Re-query CCDS DB by Protein ID:NP_001308975Link to BLAST:NP_001308975.1
Original member Current member NCBI NM_024622.6 NP_078898.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024622.6Link to Protein Sequence:NP_078898.3Re-query CCDS DB by Nucleotide ID:NM_024622Re-query CCDS DB by Protein ID:NP_078898Link to BLAST:NP_078898.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308975.1 847 Q53R41-1 847 100% 0 0
NP_078898.3 847 Q53R41-1 847 100% 0 0

Chromosomal Locations for CCDS 33318.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 169529825 169529926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169530587 169530701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169531352 169531490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169537227 169537340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169538013 169538141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169540051 169540179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169544721 169544835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169546218 169546704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169555124 169555255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169557187 169557297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169560387 169560785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169563225 169563350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169569184 169569252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 169571653 169572029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2544 nt):
ATGAAAAAAACACCTGTTTTCCTAGAGTCATTGGTTACAAATATGCTTCGTCTAAGAGCTATTTGTCCAT
TCTCCTGGAGAGTGTTTCAATTTCGACCCATCAGTTGTGAACCACTAATTATTCAGATGAATAAGTGTAC
AGATGAGGAGCAAATGTTTGGTTTTATTGAAAGAAACAAAGCCATACTTTCAGAAAAGCAAGTGGGATGT
GCATTTGATATGCTTTGGAAGCTTCAAAAGCAGAAGACCAGCCTGTTAAAAAATGCTGAGTATGTCAGAG
ACCATCCTCAATTTCTTACTCTTCATAATTTAGCTACAAATAAATTCAAATTAATGAATGACGATACCCT
GGTGAATGTGTTATACGTCACACAACAGTTTGCTGGTGAGGCCCATGACCCGCTAGTTGAAGCACTAGTT
ACAGAAGCATGGAGAAGGCTAGAAAGGTTTGATATTAAACTGCTCTCAGAATTTTCCTCTTGCCTAGCAG
ATCAGCATTTGTATTTTAGTCCATTAATGGGAAAAATAGCTGATATTGTTCATAGGAACTTGGAAACCAC
ACAGGACTTAAGTTCCTTGTCTGTCTTGATGGTCAACATATCTTCTTTAATATCACGACATTTTCAACAA
CAACTGGTGAACAAAACAGAACTTCTTTTTGACACCATAGATTCTTCTGAGGTCAACGTTGCAAAAAGCA
TAGCAAAGTTTCTTCGAAATGTTAGATATCGTTATCAACCACTATTAGAAAGATGTAATAACGTATTTTT
AAGTAATGTGGACCACCTTGATTTGGATTCCATCAGTAAAATACTTAGTGTATACAAATTTCTACAATTT
AATAGTTTTGAATTTATTATAATGGCTAAAAAGAAGCTAACTGAAATGATTCCTCTGTGTAATCATCCTG
CTAGCTTTGTAAAATTGTTTGTAGCATTGGGACCCATTGCAGGACCTGAAGAAAAGAAACAACTTAAATC
AACTATGTTATTGATGTCAGAGGACCTAACTGGCGAGCAAGCCCTGGCAGTGTTGGGAGCAATGGGAGAT
ATGGAAAGCAGAAACTCATGTCTGATTAAAAGAGTTACTTCAGTTCTGCATAAACATTTGGATGGCTATA
AACCATTAGAGTTGTTGAAGATAACTCAAGAATTAACTTTTCTGCATTTCCAAAGGAAGGAGTTTTTTGC
GAAACTTAGAGAATTACTGCTTAGTTATTTGAAAAATAGTTTCATACCAACTGAGGTGTCTGTTCTGGTC
CGTGCTATTTCCCTGCTCCCTTCTCCTCACTTGGACGAAGTGGGGATATCCCGAATTGAAGCCGTTTTAC
CACAGTGTGACCTAAATAACCTGAGTAGTTTTGCCACATCTGTTTTAAGATGGATTCAGCATGATCACAT
GTATTTGGATAATATGACTGCGAAACAACTGAAACTACTTCAAAAATTAGATCACTATGGTCGTCAGAGA
CTACAACACAGCAACAGTTTGGATCTGTTACGGAAGGAACTTAAATCTCTCAAAGGAAACACGTTTCCTG
AGTCACTTCTTGAAGAAATGATTGCTACTTTACAGCATTTCATGGATGATATTAATTACATAAATGTTGG
GGAGATTGCATCTTTTATTTCTAGTACTGATTACCTCAGTACTTTGCTACTAGATAGGATAGCCTCAGTG
GCTGTTCAGCAGATTGAAAAGATCCATCCTTTTACAATCCCTGCTATTATTCGTCCATTCAGCGTATTGA
ACTATGATCCACCTCAAAGGGATGAATTTTTGGGAACTTGCGTGCAACATCTTAATTCTTACTTAGGTAT
ATTGGATCCTTTTATATTAGTGTTTCTTGGTTTCTCTTTGGCCACACTTGAATATTTTCCAGAAGATCTG
CTAAAGGCAATTTTTAACATCAAATTCTTAGCTAGATTGGATTCTCAACTTGAAATTTTATCTCCATCTC
GAAGTGCAAGAGTCCAGTTTCATCTTATGGAGTTAAATAGATCAGTCTGCTTGGAATGCCCTGAGTTTCA
GATTCCATGGTTTCATGACCGCTTCTGTCAACAATATAATAAAGGTATTGGTGGCATGGATGGAACACAA
CAGCAGATTTTTAAAATGTTAGCAGAGGTACTAGGAGGAATCAATTGTGTAAAAGCCTCGGTTCTTACGC
CTTATTACCACAAAGTAGATTTTGAGTGTATCTTGGATAAAAGAAAAAAACCTCTTCCGTATGGAAGCCA
TAATATAGCATTGGGACAACTACCAGAAATGCCCTGGGAATCAAATATCGAAATAGTTGGATCAAGGCTG
CCACCAGGGGCTGAAAGGATTGCTTTGGAATTTTTGGATTCAAAAGCACTTTGTAGAAATATCCCTCACA
TGAAAGGAAAATCTGCTATGAAAAAACGACATTTGGAAATTCTGGGGTATCGTGTAATTCAGATTTCCCA
GTTTGAATGGAACTCTATGGCACTGTCAACAAAGGATGCTCGGATGGACTACCTGAGAGAATGTATATTT
GGAGAAGTCAAGTCATGTTTGTAG

Translation (847 aa):
MKKTPVFLESLVTNMLRLRAICPFSWRVFQFRPISCEPLIIQMNKCTDEEQMFGFIERNKAILSEKQVGC
AFDMLWKLQKQKTSLLKNAEYVRDHPQFLTLHNLATNKFKLMNDDTLVNVLYVTQQFAGEAHDPLVEALV
TEAWRRLERFDIKLLSEFSSCLADQHLYFSPLMGKIADIVHRNLETTQDLSSLSVLMVNISSLISRHFQQ
QLVNKTELLFDTIDSSEVNVAKSIAKFLRNVRYRYQPLLERCNNVFLSNVDHLDLDSISKILSVYKFLQF
NSFEFIIMAKKKLTEMIPLCNHPASFVKLFVALGPIAGPEEKKQLKSTMLLMSEDLTGEQALAVLGAMGD
MESRNSCLIKRVTSVLHKHLDGYKPLELLKITQELTFLHFQRKEFFAKLRELLLSYLKNSFIPTEVSVLV
RAISLLPSPHLDEVGISRIEAVLPQCDLNNLSSFATSVLRWIQHDHMYLDNMTAKQLKLLQKLDHYGRQR
LQHSNSLDLLRKELKSLKGNTFPESLLEEMIATLQHFMDDINYINVGEIASFISSTDYLSTLLLDRIASV
AVQQIEKIHPFTIPAIIRPFSVLNYDPPQRDEFLGTCVQHLNSYLGILDPFILVFLGFSLATLEYFPEDL
LKAIFNIKFLARLDSQLEILSPSRSARVQFHLMELNRSVCLECPEFQIPWFHDRFCQQYNKGIGGMDGTQ
QQIFKMLAEVLGGINCVKASVLTPYYHKVDFECILDKRKKPLPYGSHNIALGQLPEMPWESNIEIVGSRL
PPGAERIALEFLDSKALCRNIPHMKGKSAMKKRHLEILGYRVIQISQFEWNSMALSTKDARMDYLRECIF
GEVKSCL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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