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Report for CCDS14227.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14227.1 Public Homo sapiens X FTHL17 24 110 108 CCDS HistoryNCBI Gene:53940Re-query CCDS DB by CCDS ID:14227.1Re-query CCDS DB by GeneID:53940See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14227.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359202.5 ENSP00000368207.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359202.5Link to Ensembl Protein Viewer:ENSP00000368207.2Re-query CCDS DB by Nucleotide ID:ENST00000359202Re-query CCDS DB by Protein ID:ENSP00000368207
Original member Current member NCBI NM_031894.3 NP_114100.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031894.3Link to Protein Sequence:NP_114100.1Re-query CCDS DB by Nucleotide ID:NM_031894Re-query CCDS DB by Protein ID:NP_114100Link to BLAST:NP_114100.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114100.1 183 Q9BXU8 183 100% 0 0

Chromosomal Locations for CCDS 14227.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 31071402 31071953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (552 nt):
ATGGCCACCGCCCAGCCGTCGCAGGTGCGCCAGAAGTACGACACCAACTGCGACGCCGCCATCAACAGCC
ACATCACGCTGGAGCTCTACACCTCCTACCTGTACCTGTCTATGGCCTTCTACTTCAACCGGGACGACGT
GGCCCTGGAGAACTTCTTCCGCTACTTCCTGCGCCTGTCGGACGACAAAATGGAGCATGCCCAGAAGCTG
ATGAGGCTGCAGAACCTGCGCGGTGGCCACATCTGCCTTCACGATATCAGGAAGCCAGAGTGCCAAGGCT
GGGAGAGCGGGCTCGTGGCCATGGAGTCCGCCTTCCACCTGGAGAAGAACGTCAACCAGAGCCTGCTGGA
TCTGTACCAGCTGGCCGTGGAGAAGGGCGACCCCCAGCTGTGCCACTTCCTGGAGAGCCACTACCTGCAC
GAGCAAGTCAAGACCATCAAAGAGCTGGGTGGCTACGTGAGCAACCTGCGCAAGATTTGTTCCCCGGAAG
CCGGCCTGGCTGAGTACCTGTTCGACAAGCTCACCCTGGGCGGCCGCGTCAAAGAGACTTGA

Translation (183 aa):
MATAQPSQVRQKYDTNCDAAINSHITLELYTSYLYLSMAFYFNRDDVALENFFRYFLRLSDDKMEHAQKL
MRLQNLRGGHICLHDIRKPECQGWESGLVAMESAFHLEKNVNQSLLDLYQLAVEKGDPQLCHFLESHYLH
EQVKTIKELGGYVSNLRKICSPEAGLAEYLFDKLTLGGRVKET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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