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Report for CCDS13568.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13568.1 Public Homo sapiens 21 NRIP1 24 110 108 CCDS HistoryNCBI Gene:8204Re-query CCDS DB by CCDS ID:13568.1Re-query CCDS DB by GeneID:8204See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13568.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000318948.7 ENSP00000327213.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000318948.7Link to Ensembl Protein Viewer:ENSP00000327213.4Re-query CCDS DB by Nucleotide ID:ENST00000318948Re-query CCDS DB by Protein ID:ENSP00000327213
Original member Current member EBI ENST00000400199.5 ENSP00000383060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400199.5Link to Ensembl Protein Viewer:ENSP00000383060.1Re-query CCDS DB by Nucleotide ID:ENST00000400199Re-query CCDS DB by Protein ID:ENSP00000383060
Original member Current member EBI ENST00000400202.5 ENSP00000383063.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400202.5Link to Ensembl Protein Viewer:ENSP00000383063.1Re-query CCDS DB by Nucleotide ID:ENST00000400202Re-query CCDS DB by Protein ID:ENSP00000383063
Original member Current member NCBI NM_003489.4 NP_003480.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003489.4Link to Protein Sequence:NP_003480.2Re-query CCDS DB by Nucleotide ID:NM_003489Re-query CCDS DB by Protein ID:NP_003480Link to BLAST:NP_003480.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003480.2 1158 P48552 1158 100% 0 0

Chromosomal Locations for CCDS 13568.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 14964716 14968192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3477 nt):
ATGACTCATGGAGAAGAGCTTGGCTCTGATGTGCACCAGGATTCTATTGTTTTAACTTACCTAGAAGGAT
TACTAATGCATCAGGCAGCAGGGGGATCAGGTACTGCCGTTGACAAAAAGTCTGCTGGGCATAATGAAGA
GGATCAGAACTTTAACATTTCTGGCAGTGCATTTCCCACCTGTCAAAGTAATGGTCCAGTTCTCAATACA
CATACATATCAGGGGTCTGGCATGCTGCACCTCAAAAAAGCCAGACTGTTGCAGTCTTCTGAGGACTGGA
ATGCAGCAAAGCGGAAGAGGCTGTCTGATTCTATCATGAATTTAAACGTAAAGAAGGAAGCTTTGCTAGC
TGGCATGGTTGACAGTGTGCCTAAAGGCAAACAGGATAGCACATTACTGGCCTCTTTGCTTCAGTCATTC
AGCTCTAGGCTGCAGACTGTTGCTCTGTCACAACAAATCAGGCAGAGCCTCAAGGAGCAAGGATATGCCC
TCAGTCATGATTCTTTAAAAGTGGAGAAGGATTTAAGGTGCTATGGTGTTGCATCAAGTCACTTAAAAAC
TTTGTTGAAGAAAAGTAAAGTTAAAGATCAAAAGCCTGATACGAATCTTCCTGATGTGACTAAAAACCTC
ATCAGAGATAGGTTTGCAGAGTCTCCTCATCATGTTGGACAAAGTGGAACAAAGGTCATGAGTGAACCGT
TGTCATGTGCTGCAAGATTACAGGCTGTTGCAAGCATGGTGGAAAAAAGGGCTAGTCCTGCCACCTCACC
TAAACCTAGTGTTGCTTGTAGCCAGTTAGCATTACTTCTGTCAAGCGAAGCCCATTTGCAGCAGTATTCT
CGAGAACACGCTTTAAAAACGCAAAATGCAAATCAAGCAGCAAGTGAAAGACTTGCTGCTATGGCCAGAT
TGCAAGAAAATGGCCAGAAGGATGTTGGCAGTTACCAGCTCCCAAAAGGAATGTCAAGCCATCTTAATGG
TCAGGCAAGAACATCATCAAGCAAACTGATGGCTAGCAAAAGTAGTGCTACAGTGTTTCAAAATCCAATG
GGTATCATTCCTTCTTCCCCTAAAAATGCAGGTTATAAGAACTCACTGGAAAGAAACAATATAAAACAAG
CTGCTAACAATAGTTTGCTTTTACATCTTCTTAAAAGCCAGACTATACCTAAGCCAATGAATGGACACAG
TCACAGTGAGAGAGGAAGCATTTTTGAGGAAAGTAGTACACCTACAACTATTGATGAATATTCAGATAAC
AATCCTAGTTTTACAGATGACAGCAGTGGTGATGAAAGTTCTTATTCCAACTGTGTTCCCATAGACTTGT
CTTGCAAACACCGAACTGAAAAATCAGAATCTGACCAACCTGTTTCCCTGGATAACTTCACTCAATCCTT
GCTAAACACTTGGGATCCAAAAGTCCCAGATGTAGATATCAAAGAAGATCAAGATACCTCAAAGAATTCT
AAGCTAAACTCACACCAGAAAGTAACACTTCTTCAATTGCTACTTGGCCATAAGAATGAAGAAAATGTAG
AAAAAAACACCAGCCCTCAGGGAGTACACAATGATGTGAGCAAGTTCAATACACAAAATTATGCAAGGAC
TTCTGTGATAGAAAGCCCCAGTACAAATCGGACTACTCCAGTGAGCACTCCACCTTTACTTACATCAAGC
AAAGCAGGGTCTCCCATCAATCTCTCTCAACACTCTCTGGTCATCAAATGGAATTCCCCACCATATGTCT
GCAGTACTCAGTCTGAAAAGCTAACAAATACTGCATCTAACCACTCAATGGACCTTACAAAAAGCAAAGA
CCCACCAGGAGAGAAACCAGCCCAAAATGAAGGTGCACAGAACTCTGCAACGTTTAGTGCCAGTAAGCTG
TTACAAAATTTAGCACAATGTGGAATGCAGTCATCCATGTCAGTGGAAGAGCAGAGACCCAGCAAACAGC
TGTTAACTGGAAACACAGATAAACCGATAGGTATGATTGATAGATTAAATAGCCCTTTGCTCTCAAATAA
AACAAATGCAGTTGAAGAAAATAAAGCATTTAGTAGTCAACCAACAGGTCCTGAACCAGGGCTTTCTGGT
TCTGAAATAGAAAATCTGCTTGAAAGACGTACTGTCCTCCAGTTGCTCCTGGGGAACCCCAACAAAGGGA
AGAGTGAAAAAAAAGAGAAAACTCCCTTAAGAGATGAAAGTACTCAGGAACACTCAGAGAGAGCTTTAAG
TGAACAAATACTGATGGTGAAAATAAAATCTGAGCCTTGTGATGACTTACAAATTCCTAACACAAATGTG
CACTTGAGCCATGATGCTAAGAGTGCCCCATTCTTGGGTATGGCTCCTGCTGTGCAGAGAAGCGCACCTG
CCTTACCAGTGTCCGAAGACTTTAAATCGGAGCCTGTTTCACCTCAGGATTTTTCTTTCTCCAAGAATGG
TCTGCTAAGTCGATTGCTAAGACAAAATCAAGATAGTTACCTGGCAGATGATTCAGACAGGAGTCACAGA
AATAATGAAATGGCACTTCTAGAATCAAAGAATCTTTGCATGGTCCCTAAGAAAAGGAAGCTTTATACTG
AGCCATTAGAAAATCCATTTAAAAAGATGAAAAACAACATTGTTGATGCTGCAAACAATCACAGTGCCCC
AGAAGTACTGTATGGGTCCTTGCTTAACCAGGAAGAGCTGAAATTTAGCAGAAATGATCTTGAATTTAAA
TATCCTGCTGGTCATGGCTCAGCCAGCGAAAGTGAACACAGGAGTTGGGCCAGAGAGAGCAAAAGCTTTA
ATGTTCTGAAACAGCTGCTTCTCTCAGAAAACTGTGTGCGAGATTTGTCCCCGCACAGAAGTAACTCTGT
GGCTGACAGTAAAAAGAAAGGACACAAAAATAATGTGACCAACAGCAAACCTGAATTTAGCATTTCTTCT
TTAAATGGACTGATGTACAGTTCCACTCAGCCCAGCAGTTGCATGGATAACAGGACATTTTCATACCCAG
GTGTAGTAAAAACTCCTGTGAGTCCTACTTTCCCTGAGCACTTGGGCTGTGCAGGGTCTAGACCAGAATC
TGGGCTTTTGAATGGGTGTTCCATGCCCAGTGAGAAAGGACCCATTAAGTGGGTTATCACTGATGCGGAG
AAGAATGAGTATGAAAAAGACTCTCCAAGATTGACCAAAACCAACCCAATACTATATTACATGCTTCAAA
AAGGAGGCAATTCTGTTACCAGTCGAGAAACACAAGACAAGGACATTTGGAGGGAGGCTTCATCTGCTGA
AAGTGTCTCACAGGTCACAGCCAAAGAAGAGTTACTTCCTACTGCAGAAACGAAAGCTTCTTTCTTTAAT
TTAAGAAGCCCTTACAATAGCCATATGGGAAATAATGCTTCTCGCCCACACAGCGCAAATGGAGAAGTTT
ATGGACTTCTGGGAAGCGTGCTAACGATAAAGAAAGAATCAGAATAA

Translation (1158 aa):
MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNT
HTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSF
SSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNL
IRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYS
REHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPM
GIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDN
NPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNS
KLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSS
KAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKL
LQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSG
SEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNV
HLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHR
NNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFK
YPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISS
LNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAE
KNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFN
LRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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