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Report for CCDS44952.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44952.1 Public Homo sapiens 12 NUDT4 24 110 108 CCDS HistoryNCBI Gene:11163Re-query CCDS DB by CCDS ID:44952.1Re-query CCDS DB by GeneID:11163See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44952.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000415493.7 ENSP00000406612.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000415493.7Link to Ensembl Protein Viewer:ENSP00000406612.2Re-query CCDS DB by Nucleotide ID:ENST00000415493Re-query CCDS DB by Protein ID:ENSP00000406612
Original member Current member NCBI NM_019094.6 NP_061967.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019094.6Link to Protein Sequence:NP_061967.3Re-query CCDS DB by Nucleotide ID:NM_019094Re-query CCDS DB by Protein ID:NP_061967Link to BLAST:NP_061967.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061967.3 180 Q9NZJ9-1 180 100% 0 0

Chromosomal Locations for CCDS 44952.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 93378323 93378421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 93394609 93394719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 93395489 93395533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 93398771 93398855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 93399177 93399379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (543 nt):
ATGATGAAGTTCAAGCCCAACCAGACGCGGACCTACGACCGCGAGGGCTTCAAGAAGCGGGCGGCGTGCC
TGTGCTTCCGGAGCGAGCAGGAGGACGAGGTGCTGCTGGTGAGTAGCAGCCGGTACCCAGACCAGTGGAT
TGTCCCAGGAGGAGGAATGGAACCCGAGGAGGAACCTGGCGGTGCTGCCGTGAGGGAAGTTTATGAGGAG
GCTGGAGTCAAAGGAAAACTAGGCAGACTTCTGGGCATATTTGAGAACCAAGACCGAAAGCACAGAACAT
ATGTTTATGTTCTAACAGTCACTGAAATATTAGAAGATTGGGAAGATTCTGTTAATATTGGAAGGAAGAG
AGAGTGGTTCAAAGTAGAAGATGCTATCAAAGTTCTCCAGTGTCATAAACCTGTACATGCAGAGTATCTG
GAAAAGCTAAAGCTGGGTTGTTCCCCAGCCAATGGAAATTCTACAGTCCCTTCCCTTCCGGATAATAATG
CCTTGTTTGTAACCGCTGCACAGACCTCTGGGTTGCCATCTAGTGTAAGATAG

Translation (180 aa):
MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPDQWIVPGGGMEPEEEPGGAAVREVYEE
AGVKGKLGRLLGIFENQDRKHRTYVYVLTVTEILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYL
EKLKLGCSPANGNSTVPSLPDNNALFVTAAQTSGLPSSVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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