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Report for CCDS33773.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33773.1 Public Homo sapiens 3 DENND6A 24 110 108 CCDS HistoryNCBI Gene:201627Re-query CCDS DB by CCDS ID:33773.1Re-query CCDS DB by GeneID:201627See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33773.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311128.10 ENSP00000311401.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311128.10Link to Ensembl Protein Viewer:ENSP00000311401.5Re-query CCDS DB by Nucleotide ID:ENST00000311128Re-query CCDS DB by Protein ID:ENSP00000311401
Original member Current member NCBI NM_152678.3 NP_689891.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152678.3Link to Protein Sequence:NP_689891.1Re-query CCDS DB by Nucleotide ID:NM_152678Re-query CCDS DB by Protein ID:NP_689891Link to BLAST:NP_689891.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689891.1 608 Q8IWF6 608 100% 0 0

Chromosomal Locations for CCDS 33773.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 57628214 57628345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57628811 57628885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57630421 57630523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57630715 57630824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57630925 57630978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57633265 57633354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57634558 57634622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57634704 57634769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57641653 57641747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57645661 57645756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57646316 57646438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57657680 57657735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57659118 57659180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57660760 57660839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57661446 57661551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57663636 57663716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57666123 57666235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57672256 57672298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57672400 57672438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 57692782 57693018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1827 nt):
ATGGCTTTGAGGGGCCCTGCGGGCTTGGGGCCCGGCTCTCGAAGGCCGTTGGACGAAGCGGTGGCAGGGG
CCGAGGGCCGCGAGGCGCCGGCCCTTGTGGCGGCGGGAGGCGCGCCAGAGGACGATGAAGAGGACGATGG
CCGTGGCCGGGGCCTGCTGCGCTGGGACAGCTTCTCCGCCTGGCTGCACTGCGTGTGTGTGGTGGGCTTC
GACCTGGAGCTGGGCCAGGCCGTGGAGGTAATTTATCCTCAGCATTCCAAACTTACTGACAGAGAAAAAA
CCAATATTTGCTATTTGTCTTTTCCAGATTCAAATTCAGGTTGTCTTGGAGATACCCAGTTTTGTTTTAG
ATTTCGACAGTCTTCTGGGAGGAGGGTGTCGCTGCATTGTCTCCTGGATCAATTTGACAAAGATTTACCA
GTTTACTTAAAGAAGGATCCTGCTTATTTTTATGGATATGTGTATTTCCGACAAGTTCGAGATAAAACTC
TAAAAAGAGGCTACTTTCAGAAGTCCTTGGTTTTGATCAGCAAACTACCTTATATTCATTTTTTTCACAC
TGTGCTCAAACAGATAGCACCAGAGTATTTTGAAAAGAATGAACCTTATTTGGAAGCAGCTTGTAATGAT
GTTGATCGATGGCCTGCCCCAGTGCCAGGGAAAACATTACACCTGCCAATCATGGGGGTGGTAATGAAGG
TACGGATTCCCACATGTCATGACAAGCCTGGGACAACTCAAATAGTGCAGTTAACTCAGCAGGTGGACAC
AAATATATCTGTTATTTTACCTACTGTTCATGAGGTGGATATTTTCAGGTGTTTCTGCCCAGTTTTCCTT
CATAGTCAGATGCTCTGGGAGCTGGTGCTGTTGGGGGAGCCCCTTGTGGTTATGGCGCCATCACCATCGG
AATCATCAGAGACTGTATTGGCACTTGTTAACTGTATTTCTCCATTAAAGTACTTCAGTGATTTCCGACC
TTATTTCACTATTCATGATAGTGAATTCAAAGAATATACTACCCGTACCCAAGCTCCGCCCTCAGTTATA
TTAGGAGTAACCAACCCTTTTTTTGCTAAGACACTCCAGCACTGGCCACACATTATTCGAATAGGAGACC
TTAAACCTACAGGTGAAATTCCTAAGCAGGTTAAAGTGAAAAAACTGAAGAATCTAAAGACTCTGGATTC
CAAACCTGGAGTTTATACTTCATATAAGCCATATTTAAATAGAGATGAAGAGATCATAAAACAATTACAG
AAGGGTGTACAACAGAAACGTCCTTCTGAGGCTCAAAGTGTTATTCTTCGACGCTATTTTTTGGAACTGA
CACAAAGTTTCATCATTCCATTAGAAAGATATGTGGCAAGCTTGATGCCTTTGCAGAAAAGTATTTCCCC
ATGGAAGAGTCCACCTCAATTAAGACAGTTTCTTCCAGAAGAATTTATGAAAACACTTGAGAAAACAGGA
CCTCAGCTAACCTCTAGAATAAAAGGCGATTGGATTGGACTTTACCGGCATTTCCTAAAGTCTCCAAATT
TTGATGGCTGGTTTAAGACCCGGAGGAAGGAAATGACCCAAAAATTGGAGGCACTCCATCTAGAAGCTCT
TTGTGAAGAGGACTTACTTCTCTGGATCCAGAAACACACAGAAGTAGAAACAGTAGACCTTGTCTTGAAG
CTGAAAAATAAGCTGTTGCAGGCTGATCGAGAGCACTTACCTGTGAAACCTGACACTATGGAAAAGTTAC
GGACACACATAGATGCCATTATCTTAGCATTGCCAGAGGACTTGCAAGGCATACTGCTCAAAACGGGCAT
GACATGA

Translation (608 aa):
MALRGPAGLGPGSRRPLDEAVAGAEGREAPALVAAGGAPEDDEEDDGRGRGLLRWDSFSAWLHCVCVVGF
DLELGQAVEVIYPQHSKLTDREKTNICYLSFPDSNSGCLGDTQFCFRFRQSSGRRVSLHCLLDQFDKDLP
VYLKKDPAYFYGYVYFRQVRDKTLKRGYFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACND
VDRWPAPVPGKTLHLPIMGVVMKVRIPTCHDKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFL
HSQMLWELVLLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVI
LGVTNPFFAKTLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQ
KGVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEKTG
PQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLK
LKNKLLQADREHLPVKPDTMEKLRTHIDAIILALPEDLQGILLKTGMT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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