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Report for CCDS33548.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33548.1 Public Homo sapiens 21 MRPS6 24 110 108 CCDS HistoryNCBI Gene:64968Re-query CCDS DB by CCDS ID:33548.1Re-query CCDS DB by GeneID:64968See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33548.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399312.3 ENSP00000382250.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399312.3Link to Ensembl Protein Viewer:ENSP00000382250.2Re-query CCDS DB by Nucleotide ID:ENST00000399312Re-query CCDS DB by Protein ID:ENSP00000382250
Original member Current member NCBI NM_032476.4 NP_115865.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032476.4Link to Protein Sequence:NP_115865.1Re-query CCDS DB by Nucleotide ID:NM_032476Re-query CCDS DB by Protein ID:NP_115865Link to BLAST:NP_115865.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115865.1 125 P82932 125 100% 0 0

Chromosomal Locations for CCDS 33548.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 34073701 34073745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 34125341 34125480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 34142408 34142600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGCCCCGCTACGAGCTGGCTTTAATCCTGAAAGCCATGCAGCGGCCAGAGACTGCTGCTACTTTGAAAC
GTACGATAGAGGCCCTGATGGACAGAGGAGCAATAGTGAGGGACTTGGAAAACCTGGGTGAACGAGCGCT
TCCTTATAGGATCTCTGCCCACAGTCAGCAGCACAACAGAGGCGGGTATTTCTTGGTGGATTTTTATGCA
CCCACCGCAGCTGTTGAAAGCATGGTGGAGCACTTGTCTCGAGATATAGATGTGATTAGAGGGAATATTG
TCAAACACCCTCTGACCCAGGAACTAAAAGAATGTGAAGGGATTGTCCCAGTCCCACTCGCAGAAAAATT
ATATTCCACAAAGAAGAGGAAGAAGTGA

Translation (125 aa):
MPRYELALILKAMQRPETAATLKRTIEALMDRGAIVRDLENLGERALPYRISAHSQQHNRGGYFLVDFYA
PTAAVESMVEHLSRDIDVIRGNIVKHPLTQELKECEGIVPVPLAEKLYSTKKRKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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