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Report for CCDS33004.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33004.1 Public Homo sapiens 19 ZNF382 24 110 108 CCDS HistoryNCBI Gene:84911Re-query CCDS DB by CCDS ID:33004.1Re-query CCDS DB by GeneID:84911See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33004.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292928.7 ENSP00000292928.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292928.7Link to Ensembl Protein Viewer:ENSP00000292928.2Re-query CCDS DB by Nucleotide ID:ENST00000292928Re-query CCDS DB by Protein ID:ENSP00000292928
Original member Current member NCBI NM_001398490.1 NP_001385419.1 Accepted alive Link to Nucleotide Sequence:NM_001398490.1Link to Protein Sequence:NP_001385419.1Re-query CCDS DB by Nucleotide ID:NM_001398490Re-query CCDS DB by Protein ID:NP_001385419Link to BLAST:NP_001385419.1
Original member Current member NCBI NM_001398491.1 NP_001385420.1 Accepted alive Link to Nucleotide Sequence:NM_001398491.1Link to Protein Sequence:NP_001385420.1Re-query CCDS DB by Nucleotide ID:NM_001398491Re-query CCDS DB by Protein ID:NP_001385420Link to BLAST:NP_001385420.1
Original member Current member NCBI NM_032825.5 NP_116214.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032825.5Link to Protein Sequence:NP_116214.2Re-query CCDS DB by Nucleotide ID:NM_032825Re-query CCDS DB by Protein ID:NP_116214Link to BLAST:NP_116214.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001385419.1 550 Q96SR6-1 550 100% 0 0
NP_001385420.1 550 Q96SR6-1 550 100% 0 0
NP_116214.2 550 Q96SR6-1 550 100% 0 0

Chromosomal Locations for CCDS 33004.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36609915 36610053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36610650 36610742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36626130 36627550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1653 nt):
ATGCCCTTACAGGGATCAGTGTCATTCAAGGATGTGACTGTGGACTTCACCCAGGAGGAGTGGCAGCAAC
TAGACCCTGCTCAGAAGGCGCTTTACAGGGATGTGATGTTGGAAAACTATTGCCACTTCGTATCTGTGGG
GTTTCACATGGCTAAGCCTGATATGATCCGCAAGTTGGAACAAGGAGAAGAGCTATGGACACAGAGAATT
TTTCCAAGTTACAGCTACCTAGAAGAAGATGGGAAAACTGAAGATGTCTTAGTGAAGTTCAAAGAATACC
AAGACAGGCATTCTAGACCCCTCATATTCATCAACCACAAAAAACTAATTAAGGAGAGAAGTAATATTTA
TGGTAAAACATTTACTCTAGGCAAGAACCGTATTTCAAAAACAATACTATGTGAATATAAACCTGATGGA
AAAGTTTTGAAAAATATTTCAGAACTAGTCATTAGAAATATAAGCCCCATAAAAGAGAAGTTTGGTGACA
GTACTGGATGGGAGAAATCACTCCTCAATACCAAGCATGAGAAAATTCATCCTGCAGTGAATCTCCATAA
ACAAACAGAAAGAGTTCTCAGTGGTAAACAGGAGCTTATTCAGCATCAGAAGGTTCAAGCTCCAGAGCAA
CCATTTGACCATAATGAATGTGAAAAATCCTTCCTGATGAAAGGAATGCTATTTACACATACTAGAGCTC
ACAGAGGAGAAAGAACCTTTGAATACAATAAAGATGGAATTGCCTTCATAGAAAAGTCAAGCCTCAGTGT
CCATCCAAGTAATCTTATGGAAAAGAAGCCCTCTGCCTACAACAAATATGGGAAATTCCTCTGCAGAAAG
CCTGTTTTTATTATGCCTCAGAGACCTCAAACAGAAGAGAAACCCTTTCACTGTCCTTACTGTGGGAATA
ACTTTAGAAGGAAGTCATACCTCATTGAACATCAGCGAATTCACACAGGTGAAAAACCTTATGTTTGCAA
TCAATGTGGAAAGGCCTTCCGTCAGAAGACAGCCCTCACCCTTCATGAGAAAACACATATAGAGGGGAAA
CCCTTTATTTGTATCGATTGTGGGAAGTCCTTCCGCCAGAAGGCCACCCTCACTAGACATCACAAAACAC
ATACGGGGGAGAAAGCCTATGAATGTCCTCAGTGTGGAAGTGCCTTTAGGAAGAAGTCATACCTCATTGA
TCACCAGAGAACTCACACAGGAGAGAAACCGTATCAGTGTAATGAGTGTGGGAAGGCATTTATCCAGAAG
ACAACCCTCACTGTTCATCAGAGAACTCACACAGGAGAGAAACCCTATATTTGCAATGAATGTGGGAAGT
CCTTCTGCCAAAAGACAACCCTCACTCTCCACCAGAGAATTCACACGGGGGAAAAACCCTATATTTGTAA
TGAATGTGGGAAGTCCTTCCGCCAGAAGGCAATCCTCACTGTTCATCACAGAATACATACAGGAGAAAAA
TCCAATGGGTGTCCTCAGTGTGGGAAAGCCTTCAGTAGGAAATCAAACCTCATTCGCCATCAGAAAACTC
ACACAGGCGAGAAACCATATGAATGTAAACAGTGTGGGAAGTTCTTCAGTTGTAAGTCAAACCTCATTGT
CCATCAGAAAACTCACAAGGTAGAAACCACGGGAATTCAGTAA

Translation (550 aa):
MPLQGSVSFKDVTVDFTQEEWQQLDPAQKALYRDVMLENYCHFVSVGFHMAKPDMIRKLEQGEELWTQRI
FPSYSYLEEDGKTEDVLVKFKEYQDRHSRPLIFINHKKLIKERSNIYGKTFTLGKNRISKTILCEYKPDG
KVLKNISELVIRNISPIKEKFGDSTGWEKSLLNTKHEKIHPAVNLHKQTERVLSGKQELIQHQKVQAPEQ
PFDHNECEKSFLMKGMLFTHTRAHRGERTFEYNKDGIAFIEKSSLSVHPSNLMEKKPSAYNKYGKFLCRK
PVFIMPQRPQTEEKPFHCPYCGNNFRRKSYLIEHQRIHTGEKPYVCNQCGKAFRQKTALTLHEKTHIEGK
PFICIDCGKSFRQKATLTRHHKTHTGEKAYECPQCGSAFRKKSYLIDHQRTHTGEKPYQCNECGKAFIQK
TTLTVHQRTHTGEKPYICNECGKSFCQKTTLTLHQRIHTGEKPYICNECGKSFRQKAILTVHHRIHTGEK
SNGCPQCGKAFSRKSNLIRHQKTHTGEKPYECKQCGKFFSCKSNLIVHQKTHKVETTGIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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