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Report for CCDS46153.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46153.1 Public Homo sapiens 19 ASPDH 24 110 108 CCDS HistoryNCBI Gene:554235Re-query CCDS DB by CCDS ID:46153.1Re-query CCDS DB by GeneID:554235See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46153.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389208.9 ENSP00000373860.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389208.9Link to Ensembl Protein Viewer:ENSP00000373860.3Re-query CCDS DB by Nucleotide ID:ENST00000389208Re-query CCDS DB by Protein ID:ENSP00000373860
Original member Current member NCBI NM_001114598.2 NP_001108070.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001114598.2Link to Protein Sequence:NP_001108070.1Re-query CCDS DB by Nucleotide ID:NM_001114598Re-query CCDS DB by Protein ID:NP_001108070Link to BLAST:NP_001108070.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001108070.1 283 A6ND91-1 283 100% 0 0

Chromosomal Locations for CCDS 46153.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 50511730 50511773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50512136 50512290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50512360 50512580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50512661 50512810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50512927 50513011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50513272 50513416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50513772 50513823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGGCCGACAGGGGCCCGTGGAGGGTGGGCGTGGTGGGCTATGGCCGCCTCGGACAGTCCCTCGTCTCCC
GCCTCTTGGCTCAGGGACCAGAACTTGGCCTAGAACTTGTTTTTGTCTGGAATCGTGACCCAGGACGAAT
GGCAGGGAGCGTGCCCCCTTCCCTGCAGCTCCAGAACCTTGCTGCCCTTGGGGAAAGGCGCCCTGATCTG
GTTGTGGAAGTGGCCCATCCCAAAATAATCCATGAATCTGGGGCACAAATCCTGCGCCATGCCAATCTCC
TGGTGGGGTCCCCCTCAGCTCTAAGTGACCAGACCACAGAGCGGCAGCTCTTGGAGGCCTCACAGCACTG
GGACCACGCCGTGTTTGTGGCCCGAGGGGCCCTGTGGGGCGCTGAGGACATCAGGAGATTGGATGCAGCT
GGGGGCCTCCGGAGCCTTCGTGTCACCATGGCCACACACCCCGATGGCTTCCGGCTTGAGGGACCCCTGG
CTGCAGCCCACAGCCCTGGGCCTTGCACTGTGCTCTACGAAGGCCCTGTCCGTGGGCTCTGCCCCTTTGC
CCCGCGAAATTCCAACACCATGGCGGCGGCTGCCCTGGCTGCCCCCAGCCTGGGCTTCGATGGGGTGATT
GGGGTGCTCGTGGCTGATACCAGCCTCACGGACATGCACGTGGTGGATGTAGAGCTGAGCGGACCCCGGG
GCCCCACGGGCCGAAGCTTTGCTGTGCACACCCGCAGAGAGAACCCTGCCGAGCCAGGCGCGGTCACCGG
CTCCGCCACCGTCACGGCCTTCTGGCAGAGCCTCCTGGCCTGCTGCCAGCTCCCCTCCAGGCCGGGGATC
CATCTCTGCTGA

Translation (283 aa):
MADRGPWRVGVVGYGRLGQSLVSRLLAQGPELGLELVFVWNRDPGRMAGSVPPSLQLQNLAALGERRPDL
VVEVAHPKIIHESGAQILRHANLLVGSPSALSDQTTERQLLEASQHWDHAVFVARGALWGAEDIRRLDAA
GGLRSLRVTMATHPDGFRLEGPLAAAHSPGPCTVLYEGPVRGLCPFAPRNSNTMAAAALAAPSLGFDGVI
GVLVADTSLTDMHVVDVELSGPRGPTGRSFAVHTRRENPAEPGAVTGSATVTAFWQSLLACCQLPSRPGI
HLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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