NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS34772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34772.1 Public Homo sapiens 7 CUL1 24 110 108 CCDS HistoryNCBI Gene:8454Re-query CCDS DB by CCDS ID:34772.1Re-query CCDS DB by GeneID:8454See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325222.9 ENSP00000326804.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000325222.9Link to Ensembl Protein Viewer:ENSP00000326804.3Re-query CCDS DB by Nucleotide ID:ENST00000325222Re-query CCDS DB by Protein ID:ENSP00000326804
Original member Current member EBI ENST00000409469.5 ENSP00000387160.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409469.5Link to Ensembl Protein Viewer:ENSP00000387160.1Re-query CCDS DB by Nucleotide ID:ENST00000409469Re-query CCDS DB by Protein ID:ENSP00000387160
Original member Current member EBI ENST00000602748.5 ENSP00000473318.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000602748.5Link to Ensembl Protein Viewer:ENSP00000473318.1Re-query CCDS DB by Nucleotide ID:ENST00000602748Re-query CCDS DB by Protein ID:ENSP00000473318
Original member Current member EBI ENST00000665936.1 ENSP00000499255.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000665936.1Link to Ensembl Protein Viewer:ENSP00000499255.1Re-query CCDS DB by Nucleotide ID:ENST00000665936Re-query CCDS DB by Protein ID:ENSP00000499255
Original member Current member EBI ENST00000662716.1 ENSP00000499277.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000662716.1Link to Ensembl Protein Viewer:ENSP00000499277.1Re-query CCDS DB by Nucleotide ID:ENST00000662716Re-query CCDS DB by Protein ID:ENSP00000499277
Original member Current member EBI ENST00000663044.1 ENSP00000499398.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000663044.1Link to Ensembl Protein Viewer:ENSP00000499398.1Re-query CCDS DB by Nucleotide ID:ENST00000663044Re-query CCDS DB by Protein ID:ENSP00000499398
Original member Current member NCBI NM_001370660.1 NP_001357589.1 Accepted alive Link to Nucleotide Sequence:NM_001370660.1Link to Protein Sequence:NP_001357589.1Re-query CCDS DB by Nucleotide ID:NM_001370660Re-query CCDS DB by Protein ID:NP_001357589Link to BLAST:NP_001357589.1
Original member Current member NCBI NM_001370661.1 NP_001357590.1 Accepted alive Link to Nucleotide Sequence:NM_001370661.1Link to Protein Sequence:NP_001357590.1Re-query CCDS DB by Nucleotide ID:NM_001370661Re-query CCDS DB by Protein ID:NP_001357590Link to BLAST:NP_001357590.1
Original member Current member NCBI NM_001370662.1 NP_001357591.1 Accepted alive Link to Nucleotide Sequence:NM_001370662.1Link to Protein Sequence:NP_001357591.1Re-query CCDS DB by Nucleotide ID:NM_001370662Re-query CCDS DB by Protein ID:NP_001357591Link to BLAST:NP_001357591.1
Original member Current member NCBI NM_001370663.1 NP_001357592.1 Accepted alive Link to Nucleotide Sequence:NM_001370663.1Link to Protein Sequence:NP_001357592.1Re-query CCDS DB by Nucleotide ID:NM_001370663Re-query CCDS DB by Protein ID:NP_001357592Link to BLAST:NP_001357592.1
Original member Current member NCBI NM_001370664.1 NP_001357593.1 Accepted alive Link to Nucleotide Sequence:NM_001370664.1Link to Protein Sequence:NP_001357593.1Re-query CCDS DB by Nucleotide ID:NM_001370664Re-query CCDS DB by Protein ID:NP_001357593Link to BLAST:NP_001357593.1
Original member Current member NCBI NM_003592.3 NP_003583.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003592.3Link to Protein Sequence:NP_003583.2Re-query CCDS DB by Nucleotide ID:NM_003592Re-query CCDS DB by Protein ID:NP_003583Link to BLAST:NP_003583.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357589.1 776 Q13616 776 100% 0 0
NP_001357590.1 776 Q13616 776 100% 0 0
NP_001357591.1 776 Q13616 776 100% 0 0
NP_001357592.1 776 Q13616 776 100% 0 0
NP_001357593.1 776 Q13616 776 100% 0 0
NP_003583.2 776 Q13616 776 100% 0 0

Chromosomal Locations for CCDS 34772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 148730123 148730262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148753976 148754150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148756983 148757150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148759304 148759354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148759548 148759638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148760333 148760496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148766561 148766723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148767619 148767749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148783783 148783890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148783971 148784077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148786551 148786599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148786989 148787120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148788557 148788674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148789750 148789826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148790310 148790441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148792726 148792818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148797812 148797859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148797937 148798019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148798572 148798677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148799275 148799388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 148800502 148800582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2331 nt):
ATGTCGTCAACCCGGAGCCAGAACCCCCACGGCCTGAAGCAGATTGGCCTGGACCAGATCTGGGACGACC
TCAGAGCCGGCATCCAGCAGGTGTACACACGGCAGAGCATGGCCAAGTCCAGATATATGGAGCTCTACAC
TCATGTTTATAACTACTGTACTAGTGTTCACCAGTCAAACCAAGCACGAGGAGCTGGAGTTCCTCCTTCT
AAGTCGAAAAAGGGGCAGACACCTGGAGGAGCTCAGTTTGTTGGCCTGGAATTATATAAACGACTTAAGG
AATTTTTGAAGAATTACTTGACAAATCTTCTTAAGGATGGAGAAGATTTGATGGATGAGAGTGTACTGAA
ATTCTACACTCAACAATGGGAAGATTATCGATTTTCAAGCAAAGTGCTGAATGGAATTTGTGCCTACCTC
AATAGACATTGGGTTCGCCGTGAATGTGACGAAGGACGAAAAGGAATATATGAAATCTATTCGCTTGCAT
TGGTGACTTGGAGAGACTGTCTGTTCAGGCCACTGAATAAACAGGTAACAAATGCTGTTTTAAAGCTGAT
TGAAAAGGAAAGGAATGGTGAAACCATCAATACAAGATTGATTAGTGGAGTTGTACAGTCTTACGTGGAA
TTGGGGCTGAATGAAGATGATGCATTTGCAAAGGGCCCTACGTTAACAGTGTATAAAGAATCCTTTGAAT
CTCAATTTTTGGCTGACACAGAGAGATTTTATACCAGAGAGAGTACTGAATTCTTGCAGCAGAACCCAGT
TACTGAATATATGAAAAAGGCAGAGGCTCGTCTGCTTGAGGAACAACGAAGAGTTCAGGTTTACCTTCAT
GAAAGCACACAAGATGAATTAGCAAGGAAATGTGAACAAGTCCTCATTGAAAAACACTTGGAAATTTTCC
ACACAGAATTTCAGAATTTATTGGATGCTGACAAAAATGAAGATTTGGGACGCATGTATAATCTTGTATC
TAGAATCCAGGATGGCCTAGGAGAATTGAAAAAACTGTTGGAGACACACATTCATAATCAGGGTCTTGCA
GCCATTGAAAAGTGTGGAGAAGCTGCTTTAAATGACCCCAAAATGTATGTACAGACAGTGCTTGATGTTC
ATAAAAAATACAATGCCCTGGTAATGTCTGCATTCAACAATGACGCTGGCTTTGTGGCTGCTCTTGATAA
GGCTTGTGGTCGCTTCATAAACAACAACGCGGTTACCAAGATGGCCCAATCATCCAGTAAATCCCCTGAG
TTGCTGGCTCGATACTGTGACTCCTTGTTGAAGAAAAGTTCCAAGAACCCAGAGGAGGCAGAACTAGAAG
ACACACTCAATCAAGTGATGGTTGTCTTCAAGTACATAGAAGACAAAGACGTATTTCAGAAGTTCTATGC
GAAGATGCTCGCCAAGAGGCTCGTCCACCAGAACAGTGCAAGTGACGATGCCGAAGCCAGCATGATCTCC
AAGTTAAAGCAAGCTTGCGGGTTCGAGTACACCTCTAAACTTCAGCGCATGTTTCAAGACATTGGCGTGA
GCAAAGATCTGAACGAGCAATTCAAAAAGCACTTGACAAACTCAGAACCCCTAGACTTGGATTTCAGCAT
TCAAGTGCTGAGCTCCGGGTCCTGGCCCTTCCAGCAGTCTTGTACATTTGCCTTGCCGTCAGAGTTGGAA
CGTAGTTATCAGCGATTCACAGCTTTCTACGCCAGCCGCCACAGTGGCCGAAAATTGACGTGGTTATATC
AGTTGTCTAAAGGAGAATTGGTAACTAACTGCTTCAAAAACAGATATACTTTGCAGGCGTCGACATTCCA
GATGGCTATCCTGCTTCAGTACAACACGGAAGATGCCTACACTGTGCAGCAGCTGACCGACAGCACTCAA
ATTAAAATGGACATTTTGGCGCAAGTTTTACAGATTTTATTAAAGTCGAAGCTATTGGTCTTGGAAGATG
AAAATGCAAATGTTGATGAGGTGGAATTGAAGCCAGATACCTTAATAAAATTATATCTTGGTTATAAAAA
TAAGAAATTAAGGGTTAACATCAATGTGCCAATGAAAACCGAACAGAAGCAGGAACAAGAAACCACACAC
AAAAACATCGAGGAAGACCGCAAACTACTGATTCAGGCGGCCATCGTGAGAATCATGAAGATGAGGAAGG
TTCTGAAACACCAGCAGTTACTTGGCGAGGTCCTCACTCAGCTGTCCTCCAGGTTCAAACCTCGAGTCCC
TGTGATCAAGAAATGCATTGACATTCTAATTGAGAAAGAATATTTGGAGCGAGTGGATGGTGAAAAGGAC
ACCTACAGTTACTTGGCTTAA

Translation (776 aa):
MSSTRSQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSNQARGAGVPPS
KSKKGQTPGGAQFVGLELYKRLKEFLKNYLTNLLKDGEDLMDESVLKFYTQQWEDYRFSSKVLNGICAYL
NRHWVRRECDEGRKGIYEIYSLALVTWRDCLFRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVE
LGLNEDDAFAKGPTLTVYKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLH
ESTQDELARKCEQVLIEKHLEIFHTEFQNLLDADKNEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLA
AIEKCGEAALNDPKMYVQTVLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTKMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMIS
KLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVLSSGSWPFQQSCTFALPSELE
RSYQRFTAFYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQ
IKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTEQKQEQETTH
KNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKD
TYSYLA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH