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Report for CCDS46006.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46006.1 Public Homo sapiens 19 RASAL3 24 110 108 CCDS HistoryNCBI Gene:64926Re-query CCDS DB by CCDS ID:46006.1Re-query CCDS DB by GeneID:64926See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46006.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343625.12 ENSP00000341905.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343625.12Link to Ensembl Protein Viewer:ENSP00000341905.5Re-query CCDS DB by Nucleotide ID:ENST00000343625Re-query CCDS DB by Protein ID:ENSP00000341905
Original member Current member NCBI NM_022904.3 NP_075055.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022904.3Link to Protein Sequence:NP_075055.1Re-query CCDS DB by Nucleotide ID:NM_022904Re-query CCDS DB by Protein ID:NP_075055Link to BLAST:NP_075055.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075055.1 1011 Q86YV0-1 1011 100% 0 0

Chromosomal Locations for CCDS 46006.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 15451795 15451938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15452045 15452108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15452658 15452815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15453107 15453497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15454149 15454267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15454361 15454562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15454657 15454893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15456104 15456248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15456502 15456646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15457292 15457834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15458328 15458426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15458529 15458655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15460203 15460258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15461060 15461121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15461218 15461296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15461471 15461607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 15464031 15464358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3036 nt):
ATGGACCCACCGTCGCCAAGCCGGACCTCCCAAACCCAGCCCACAGCCACCTCTCCGCTGACTTCCTACC
GCTGGCACACAGGGGGCGGTGGGGAGAAGGCGGCTGGAGGGTTCCGCTGGGGCCGCTTTGCTGGCTGGGG
CAGGGCCCTGAGCCACCAGGAGCCCATGGTCAGCACCCAGCCAGCCCCTCGCTCGATATTCCGTCGGGTC
CTATCTGCGCCTCCCAAGGAGTCACGGACCAGTCGCCTTCGACTCTCCAAGGCCCTCTGGGGGAGGCATA
AGAACCCACCGCCGGAGCCAGACCCGGAGCCGGAGCAGGAGGCCCCAGAGCTGGAGCCGGAGCCAGAGCT
GGAGCCCCCTACCCCACAGATCCCTGAGGCCCCCACACCCAACGTGCCTGTCTGGGACATTGGGGGCTTC
ACCCTGCTTGATGGGAAGCTGGTGCTGCTTGGAGGAGAGGAGGAGGGTCCTCGAAGGCCCCGGGTGGGAA
GTGCTAGCTCCGAGGGCAGCATCCACGTGGCCATGGGGAACTTCAGGGATCCAGATCGGATGCCTGGAAA
AACAGAACCGGAGACTGCTGGTCCCAACCAGGTCCACAACGTTCGGGGGTTGCTCAAGAGGCTGAAAGAG
AAGAAAAAGGCCAGGTTGGAGCCCCGGGATGGACCCCCCAGTGCTCTGGGCTCTAGGGAGTCGCTGGCCA
CACTCTCTGAACTGGACCTGGGTGCCGAGCGGGATGTGCGGATCTGGCCACTGCACCCCAGCCTCCTGGG
GGAGCCCCACTGCTTTCAGGTAACCTGGACGGGTGGAAGCCGCTGCTTCTCTTGTCGCTCGGCCGCTGAG
AGAGACCGCTGGATCGAGGACCTTCGTCGCCAATTCCAGCCCACCCAGGACAACGTGGAGCGGGAAGAGA
CATGGCTGAGCGTGTGGGTGCACGAAGCGAAGGGGCTTCCCCGAGCAGCGGCGGGGGCACCCGGCGTGCG
CGCCGAGCTGTGGCTGGATGGCGCGCTGCTGGCACGCACGGCGCCTCGGGCCGGCCCAGGCCAGCTCTTC
TGGGCCGAGCGCTTCCACTTCGAGGCGCTGCCACCGGCACGTCGCCTGTCGCTGCGGCTGCGCGGCTTGG
GCCCGGGAAGCGCGGTGCTGGGCCGCGTGGCCCTGGCGCTGGAGGAGCTGGACGCCCCACGCGCGCCTGC
CGCCGGTCTGGAGCGCTGGTTCCCGCTGCTCGGGGCGCCGGCGGGCGCAGCGCTGCGGGCGCGGATTCGG
GCGCGTCGCCTGCGCGTGCTGCCGTCCGAGCGCTACAAGGAGCTGGCGGAGTTCCTCACCTTCCACTATG
CGCGCCTCTGCGGGGCCCTGGAGCCCGCGCTGCCTGCGCAGGCCAAGGAGGAGCTGGCGGCAGCCATGGT
GCGCGTGCTGCGGGCCACCGGCCGGGCGCAGGCGCTGGTGACTGACCTGGGCACTGCGGAGCTGGCGCGC
TGTGGAGGCCGTGAGGCGCTGCTGTTCCGGGAAAACACATTGGCCACCAAGGCTATCGATGAGTACATGA
AGCTCGTGGCACAGGATTACCTCCAGGAGACCCTGGGACAGGTTGTGCGGCGTCTCTGTGCTTCTACTGA
GGACTGTGAAGTGGACCCCAGCAAATGTCCAGCCTCGGAGCTGCCAGAGCACCAGGCCAGACTTCGGAAC
AGCTGCGAGGAGGTCTTCGAAACCATTATCCATTCCTACGACTGGTTCCCTGCGGAGCTGGGCATCGTGT
TCTCAAGCTGGCGAGAAGCATGTAAAGAACGTGGCTCTGAGGTGCTGGGCCCCCGACTGGTGTGCGCCTC
CCTCTTCCTGCGGCTCCTGTGCCCTGCCATCCTGGCACCCAGCCTCTTTGGTTTGGCACCAGACCATCCA
GCACCCGGCCCAGCCCGCACCCTCACACTGATTGCCAAGGTCATCCAGAACCTCGCCAACCGTGCCCCGT
TCGGTGAGAAGGAGGCCTACATGGGCTTCATGAATAGCTTCCTGGAGGAACATGGACCAGCCATGCAATG
CTTCCTGGACCAGGTAGCCATGGTGGATGTGGATGCTGCCCCCAGTGGTTACCAGGGCAGTGGTGATCTG
GCCCTCCAGTTAGCTGTCCTGCATGCCCAGCTCTGTACAATTTTTGCTGAGCTTGACCAGACAACCCGAG
ACACCCTGGAACCACTGCCCACCATCCTGCGAGCCATTGAGGAGGGCCAGCCTGTGCTTGTGTCAGTGCC
AATGCGTCTCCCACTGCCCCCGGCCCAGGTCCACTCCAGCCTCTCCGCAGGGGAGAAGCCCGGCTTCCTG
GCCCCCCGGGACCTCCCCAAGCACACCCCTCTCATCTCCAAGAGCCAGTCTCTGCGCAGCGTTCGCCGCT
CAGAGAGTTGGGCCCGGCCACGGCCGGACGAAGAGCGGCCCCTGCGGCGGCCCCGGCCGGTGCAGCGCAC
GCAGAGTGTCCCGGTCCGGCGTCCTGCCCGCCGCCGCCAATCTGCGGGGCCCTGGCCGCGACCCAAAGGC
TCCCTGAGCATGGGACCAGCGCCCCGCGCCCGGCCTTGGACCCGGGACTCCGCCTCGCTGCCTCGGAAGC
CGTCGGTACCCTGGCAGCGCCAAATGGACCAGCCGCAAGACCGAAACCAGGCACTGGGCACGCACCGACC
TGTGAACAAGTTGGCAGAGCTGCAGTGCGAGGTGGCCGCTCTGCGTGAGGAGCAGAAAGTGCTGTCCCGC
CTCGTGGAGTCGCTGAGCACCCAAATCCGGGCCTTGACGGAGCAGCAGGAGCAGCTGCGGGGCCAGCTGC
AGGATCTGGACTCCAGGCTCCGTGCTGGGAGCTCAGAGTTTGATTCAGAGCACAACCTAACAAGCAATGA
AGGGCACAGTCTGAAAAACCTGGAGCACCGCCTAAATGAGATGGAGAGAACTCAGGCTCAGCTGAGGGAT
GCTGTCCAGAGCCTGCAGCTTTCTCCAAGGACGCGGGGGTCTTGGAGTCAACCCCAGCCCCTCAAAGCAC
CCTGCCTCAATGGAGACACCACCTGA

Translation (1011 aa):
MDPPSPSRTSQTQPTATSPLTSYRWHTGGGGEKAAGGFRWGRFAGWGRALSHQEPMVSTQPAPRSIFRRV
LSAPPKESRTSRLRLSKALWGRHKNPPPEPDPEPEQEAPELEPEPELEPPTPQIPEAPTPNVPVWDIGGF
TLLDGKLVLLGGEEEGPRRPRVGSASSEGSIHVAMGNFRDPDRMPGKTEPETAGPNQVHNVRGLLKRLKE
KKKARLEPRDGPPSALGSRESLATLSELDLGAERDVRIWPLHPSLLGEPHCFQVTWTGGSRCFSCRSAAE
RDRWIEDLRRQFQPTQDNVEREETWLSVWVHEAKGLPRAAAGAPGVRAELWLDGALLARTAPRAGPGQLF
WAERFHFEALPPARRLSLRLRGLGPGSAVLGRVALALEELDAPRAPAAGLERWFPLLGAPAGAALRARIR
ARRLRVLPSERYKELAEFLTFHYARLCGALEPALPAQAKEELAAAMVRVLRATGRAQALVTDLGTAELAR
CGGREALLFRENTLATKAIDEYMKLVAQDYLQETLGQVVRRLCASTEDCEVDPSKCPASELPEHQARLRN
SCEEVFETIIHSYDWFPAELGIVFSSWREACKERGSEVLGPRLVCASLFLRLLCPAILAPSLFGLAPDHP
APGPARTLTLIAKVIQNLANRAPFGEKEAYMGFMNSFLEEHGPAMQCFLDQVAMVDVDAAPSGYQGSGDL
ALQLAVLHAQLCTIFAELDQTTRDTLEPLPTILRAIEEGQPVLVSVPMRLPLPPAQVHSSLSAGEKPGFL
APRDLPKHTPLISKSQSLRSVRRSESWARPRPDEERPLRRPRPVQRTQSVPVRRPARRRQSAGPWPRPKG
SLSMGPAPRARPWTRDSASLPRKPSVPWQRQMDQPQDRNQALGTHRPVNKLAELQCEVAALREEQKVLSR
LVESLSTQIRALTEQQEQLRGQLQDLDSRLRAGSSEFDSEHNLTSNEGHSLKNLEHRLNEMERTQAQLRD
AVQSLQLSPRTRGSWSQPQPLKAPCLNGDTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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