NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS10832.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10832.1 Public Homo sapiens 16 EXOC3L1 24 110 108 CCDS HistoryNCBI Gene:283849Re-query CCDS DB by CCDS ID:10832.1Re-query CCDS DB by GeneID:283849See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10832.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314586.11 ENSP00000325674.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314586.11Link to Ensembl Protein Viewer:ENSP00000325674.6Re-query CCDS DB by Nucleotide ID:ENST00000314586Re-query CCDS DB by Protein ID:ENSP00000325674
Original member Current member NCBI NM_178516.4 NP_848611.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178516.4Link to Protein Sequence:NP_848611.2Re-query CCDS DB by Nucleotide ID:NM_178516Re-query CCDS DB by Protein ID:NP_848611Link to BLAST:NP_848611.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848611.2 746 Q86VI1 746 100% 0 0

Chromosomal Locations for CCDS 10832.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67184394 67184604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67184686 67184810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67184902 67185057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67185136 67185258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67185361 67185490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67186237 67186347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67186557 67186657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67186759 67186884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67187021 67187138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67187225 67187837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67188721 67188940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67189020 67189180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67189631 67189676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2241 nt):
ATGGACTCAGCAGCCAAGGATGAGATGCAGCCGGCGTTGTCCCCTGGACCTGAGTGGCCAGAGCAGGAGC
GGGCAGAGCAGCTGGCCCGGGGTGCAGCGCTCAAGTGGGCCTCAGGCATCTTCTACCGGCCGGAGCAGCT
GGCCAGGCTAGGCCAGTACCGCAGCCGCGAGGTGCAGCGTACCTGCTCCCTGGAATCGCGCCTCAAGTCA
GTGATGCAGTCATACCTGGAAGGCGTGCAGACTGGTGTGTGGCAGCTGGCCCAGGCCATTGAGGTGGTGC
AGGGAACCCGGGAGGCCCTGAGCCAGGCCCGTGGGTTGCTCCAGGGCATGTCCCAGGCCTTACAGACTCT
AGAGCCCCTACGGGAGCGGGTTGCCCAGCACAAGCAACTGCAGGCCCTGTCTCACCTGCTGCCTCGGCTG
CGGGCAGTGCCGGCTGCAGTGTCCCACACACAGACTCTGATTGATGGCCAACAGTTCTTGGAGGCATATG
TGAGCCTTCGGGAGCTGGAGCAGCTGCGAGAGGATACGTGGGCACCCCTGGGGGGCCTGGAGTTGCCAGT
CTTCCAGGGGCTGGACCTTCTGTTCGAGGCACTGGGCCAGGCTGTGGAAGCAGCTGCAGGGGCCGCAGGG
AAGCTGGCACGGGAGGACCCAGCCCTGTTGGTGGCTGCTGTGCGTGTGGCGGAGGTGGAGACTGGACGAA
CAACCCCCCTGGGCCAGGTCCCCCGGGACTGGCGTCAGCGCTGTCTGAGGGCACTACAGGAGGGCCTGGA
GCAGGCCCACTTTGGGTCACCTCTGCTGCCTGCACCAGGGGCCCTACCAGGGTGGCTGGAGGCTCTGCGA
GTGGCCCTGCCAGTCGAGTTGGCCACAGCTGAGGCACTAGTAGCGCCTTGCTGCCCGCCACAGTACAACG
TGGTCCAGCTATGGGCCCACACGCTGCATAGTGGTTTGCGCCGCAGCCTGCAGAACCTCCTTGCAGGGCC
TGAGCTAGAAGCTGCGGATGCCTTCGCCTTGCTGCACTGGGCACTGCATGTGTACCTGGGGCAGGAAATG
ATGGGGAGCCTGGAGTTGGGGCCTGAGGCTGATGTGTCCCAGCTGGAGCCCCTTCTGACCTTGGAGAACA
TTGAGCAGCTGGAGGCAACATTTGTGGCCAACATCCAGGCAAGTGTGTCTCAGTGGCTGCAGAATGCACT
GGATGGGGAGGTAGCTGAGTGGGGCCGGGAGCATGGGCCCAACACAGACCCGTCTGGCTCCTATTACTCA
CCAATGCCAGCCATTGTGCTGCAGATCCTGGAAGAGAACATTCGTGTGGCCAGCCTGGTCAGTGAGTCAC
TGCAACAGCGAGTGCATGGCATGGCACTGTCAGAACTGGGCACATTCTTGAGGAGCTTCAGTGATGCTCT
GATCCGATTCTCCCGAGACCACTTCAGGGGGAAATCAATGGCCCCTCATTACGTGCCCTACCTACTGGCC
GCCCTCAACCACAAGTCAGCACTCAGCTCCTCAGTGTCTGTCCTGCAGCTGGACGGGGCGCCTTCAGGGG
CCTTGGCTCCAGTGGAAGCTGCGCTGGACGAGTTGCAGAGGAGGATCTACCGCTTGGTGTTGGAGGCGCT
GCAGGCGGAGCTCCAGCCCCTGTTCGCGGATCTGCCCTCGCGCCAATGGCTGTCGAGCCCTGAGCTCCTG
CAAAGTGTGTGTGAACGGACGGGGCGCTTCTGCCGGGACTTCTGGCGCGTGCGGAACCCCACGGTTCAGC
TGCTGCTGGCTGAGGCCGAGCGTGCCGTGGTGCTCCAGTACCTGAGCGCGCTGATGCAAGGCCGCCTGGT
GTGCCGCGGAGCCGACGAGAGGACCCAGGCGGCCGAGCGCCTGCGGCACGATGCTGCCCAGCTTCAGCAG
CTTTTCCTCAGTTTGGGCCTGGAGGAGAACGCGCACTGCGCGCCGGTGCTGCTCGCCCTGAGGGAGCTGC
TAAACCTCCGCGACCCCGCGCTGCTGGGCCTGGAGGTGGCTGGCCTGCGGCAACAATTTCCCGACGTGAG
CGAGGACCACGTCTCCGCCCTCTTGGGCCTGCGCGGGGACTTGTCCCGGGAGCAGCACCTGGCCGCGCTC
AGCTCCCTGCAGGCTGCGCTGCCGCCGTCGCCCCGCGCGAGCCGCCGCGTCCTCTTCAGCCTAGTGCCCG
CGCCCGCGCTCGCGCCGGCCTCCTGCCTGCCCTCGGGGTCCTGCGCCCGAGCCCTGCTGCTCGCAGAATA
A

Translation (746 aa):
MDSAAKDEMQPALSPGPEWPEQERAEQLARGAALKWASGIFYRPEQLARLGQYRSREVQRTCSLESRLKS
VMQSYLEGVQTGVWQLAQAIEVVQGTREALSQARGLLQGMSQALQTLEPLRERVAQHKQLQALSHLLPRL
RAVPAAVSHTQTLIDGQQFLEAYVSLRELEQLREDTWAPLGGLELPVFQGLDLLFEALGQAVEAAAGAAG
KLAREDPALLVAAVRVAEVETGRTTPLGQVPRDWRQRCLRALQEGLEQAHFGSPLLPAPGALPGWLEALR
VALPVELATAEALVAPCCPPQYNVVQLWAHTLHSGLRRSLQNLLAGPELEAADAFALLHWALHVYLGQEM
MGSLELGPEADVSQLEPLLTLENIEQLEATFVANIQASVSQWLQNALDGEVAEWGREHGPNTDPSGSYYS
PMPAIVLQILEENIRVASLVSESLQQRVHGMALSELGTFLRSFSDALIRFSRDHFRGKSMAPHYVPYLLA
ALNHKSALSSSVSVLQLDGAPSGALAPVEAALDELQRRIYRLVLEALQAELQPLFADLPSRQWLSSPELL
QSVCERTGRFCRDFWRVRNPTVQLLLAEAERAVVLQYLSALMQGRLVCRGADERTQAAERLRHDAAQLQQ
LFLSLGLEENAHCAPVLLALRELLNLRDPALLGLEVAGLRQQFPDVSEDHVSALLGLRGDLSREQHLAAL
SSLQAALPPSPRASRRVLFSLVPAPALAPASCLPSGSCARALLLAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH