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Report for CCDS32516.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32516.1 Public Homo sapiens 16 SPIRE2 24 110 108 CCDS HistoryNCBI Gene:84501Re-query CCDS DB by CCDS ID:32516.1Re-query CCDS DB by GeneID:84501See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32516.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378247.8 ENSP00000367494.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378247.8Link to Ensembl Protein Viewer:ENSP00000367494.3Re-query CCDS DB by Nucleotide ID:ENST00000378247Re-query CCDS DB by Protein ID:ENSP00000367494
Original member Current member NCBI NM_032451.2 NP_115827.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032451.2Link to Protein Sequence:NP_115827.1Re-query CCDS DB by Nucleotide ID:NM_032451Re-query CCDS DB by Protein ID:NP_115827Link to BLAST:NP_115827.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115827.1 714 Q8WWL2-1 714 100% 0 0

Chromosomal Locations for CCDS 32516.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 89828551 89828794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89845322 89845365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89850304 89850660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89854286 89854366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89854487 89854651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89855600 89855686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89856113 89856236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89858338 89858507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89859165 89859354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89860683 89860795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89863476 89863610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89863794 89863861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89868189 89868216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89869567 89869682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 89870050 89870272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2145 nt):
ATGGCCCGGGCGGGCAGCTGCGGCGGCGCCGCGGCGGGCGCAGGGCGGCCGGAGCCCTGGGAGCTGTCCC
TGGAGGAGGTGCTGAAGGCCTACGAGCAGCCGCTCAACGAGGAGCAGGCGTGGGCCGTGTGCTTCCAGGG
CTGCCGCGGGCTGCGGGGCTCGCCGGGCCGGCGCCTGCGGGATACCGGGGACCTCCTGCTGCGCGGGGAC
GGCTCGGTCGGGGCGCGGGAGCCCGAGGCCGCGGAACCTGCAACCATGGTCGTGCCACTAGCCAGCTCGG
AAGCCCAGACCGTGCAGTCCCTCGGCTTCGCCATCTACCGCGCGCTGGACTGGGGGCTGGACGAGAGCGA
GGAGCGCGAACTCAGCCCTCAGCTGGAGCGGCTCATCGACCTCATGGCCAACAACGACAGCGAGGACAGC
GGCTGCGGTGCCGCCGATGAGGGCTACGGGGGTCCCGAGGAGGAGGAGGAGGCCGAGGGCGTCCCCCGCA
GCGTGCGCACCTTTGCCCAGGCCATGCGGCTGTGCGCGGCGCGGCTGACCGACCCCCGGGGCGCACAGGC
GCATTACCAGGCCGTGTGCCGCGCGCTCTTCGTGGAGACGCTGGAGCTGCGGGCCTTCCTGGCCAGGGTC
CGGGAGGCCAAGGAGATGCTGCAGAAGCTTCGGGAGGACGAGCCGCATCTGGAGACGCCTCGGGCAGAGC
TGGACAGCCTGGGTCACACAGACTGGGCCCGACTGTGGGTTCAGCTCATGCGGGAGCTCCGCCGCGGAGT
GAAGCTGAAGAAGGTGCAAGAGCAGGAGTTCAACCCCCTCCCCACCGAGTTCCAGCTCACGCCCTTCGAG
ATGCTGATGCAGGACATCCGGGCCCGGAACTACAAGCTGCGCAAGGTCATGGTGGATGGGGACATCCCGC
CCCGGGTGAAGAAGGACGCTCACGAGCTCATCCTGGACTTTATCCGCTCACGGCCTCCACTGAAGCAGGT
CTCTGAGAGGCGGCTGCGCCCGTTGCCACCAAAGCAAAGGTCCCTGCATGAGAAGATCCTGGAGGAGATC
AAGCAGGAGCGGAGGCTGCGCCCGGTGCGGGGCGAGGGCTGGGCTGCCCGCGGGTTTGGCTCTCTGCCCT
GCATCCTCAACGCCTGCTCCGGAGATGCCAAGTCCACCTCCTGCATCAACCTGTCAGTCACAGATGCTGG
GGGCAGCGCCCAGCGCCCGCGGCCCCGCGTGCTGCTCAAGGCGCCTACCTTGGCTGAAATGGAAGAGATG
AATACATCTGAGGAAGAAGAGTCTCCGTGTGGGGAGGTGACGCTGAAACGGGACCGCTCCTTCTCAGAGC
ATGACCTGGCCCAGCTCCGAAGTGAGGTGGCCTCTGGCCTGCAGTCGGCCACCCACCCCCCAGGAGGGAC
GGAGCCACCACGGCCCCGAGCTGGCAGTGCGCATGTGTGGAGGCCCGGCTCCCGAGACCAGGGTACCTGT
CCCGCGAGTGTCTCTGACCCCAGCCACCCCCTACTCAGCAACCGGGGCTCCTCGGGGGACAGACCCGAGG
CCTCCATGACCCCCGATGCCAAACACCTGTGGCTGGAGTTCAGCCACCCCGTGGAGAGCCTGGCGCTGAC
TGTGGAAGAGGTGATGGACGTGCGCCGTGTGCTGGTGAAGGCCGAGATGGAAAAGTTTTTGCAGAACAAG
GAGCTCTTCAGCAGTCTGAAGAAGGGGAAGATTTGCTGCTGCTGCCGGGCCAAGTTCCCGCTGTTCTCGT
GGCCGCCCAGCTGTCTCTTCTGCAAGAGAGCCGTCTGCACTTCCTGTAGCATAAAGATGAAGATGCCTTC
TAAGAAATTTGGACACATCCCTGTCTACACACTGGGCTTTGAGAGTCCTCAGAGGGTATCAGCTGCCAAA
ACCGCGCCAATCCAGAGAAGAGACATCTTTCAGTCTCTGCAAGGGCCACAGTGGCAGAGCGTGGAGGAGG
CGTTCCCCCACATCTACTCCCACGGCTGTGTCCTGAAGGATGTCTGCAGTGAGTGCACCAGCTTTGTGGC
AGACGTGGTGCGTTCCAGCCGCAAGAGCGTGGACGTCCTCAACACTACGCCACGACGCAGTCGCCAGACC
CAATCCCTCTACATCCCTAACACCAGGACTCTTGACTTCAAGTGA

Translation (714 aa):
MARAGSCGGAAAGAGRPEPWELSLEEVLKAYEQPLNEEQAWAVCFQGCRGLRGSPGRRLRDTGDLLLRGD
GSVGAREPEAAEPATMVVPLASSEAQTVQSLGFAIYRALDWGLDESEERELSPQLERLIDLMANNDSEDS
GCGAADEGYGGPEEEEEAEGVPRSVRTFAQAMRLCAARLTDPRGAQAHYQAVCRALFVETLELRAFLARV
REAKEMLQKLREDEPHLETPRAELDSLGHTDWARLWVQLMRELRRGVKLKKVQEQEFNPLPTEFQLTPFE
MLMQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRSRPPLKQVSERRLRPLPPKQRSLHEKILEEI
KQERRLRPVRGEGWAARGFGSLPCILNACSGDAKSTSCINLSVTDAGGSAQRPRPRVLLKAPTLAEMEEM
NTSEEEESPCGEVTLKRDRSFSEHDLAQLRSEVASGLQSATHPPGGTEPPRPRAGSAHVWRPGSRDQGTC
PASVSDPSHPLLSNRGSSGDRPEASMTPDAKHLWLEFSHPVESLALTVEEVMDVRRVLVKAEMEKFLQNK
ELFSSLKKGKICCCCRAKFPLFSWPPSCLFCKRAVCTSCSIKMKMPSKKFGHIPVYTLGFESPQRVSAAK
TAPIQRRDIFQSLQGPQWQSVEEAFPHIYSHGCVLKDVCSECTSFVADVVRSSRKSVDVLNTTPRRSRQT
QSLYIPNTRTLDFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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