NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12632.1 Public Homo sapiens 19 ZNF45 24 110 108 CCDS HistoryNCBI Gene:7596Re-query CCDS DB by CCDS ID:12632.1Re-query CCDS DB by GeneID:7596See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12632.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269973.10 ENSP00000269973.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269973.10Link to Ensembl Protein Viewer:ENSP00000269973.4Re-query CCDS DB by Nucleotide ID:ENST00000269973Re-query CCDS DB by Protein ID:ENSP00000269973
Original member Current member EBI ENST00000589703.5 ENSP00000468579.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589703.5Link to Ensembl Protein Viewer:ENSP00000468579.1Re-query CCDS DB by Nucleotide ID:ENST00000589703Re-query CCDS DB by Protein ID:ENSP00000468579
Original member Current member EBI ENST00000615985.4 ENSP00000481895.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615985.4Link to Ensembl Protein Viewer:ENSP00000481895.1Re-query CCDS DB by Nucleotide ID:ENST00000615985Re-query CCDS DB by Protein ID:ENSP00000481895
Original member Current member NCBI NM_003425.4 NP_003416.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003425.4Link to Protein Sequence:NP_003416.1Re-query CCDS DB by Nucleotide ID:NM_003425Re-query CCDS DB by Protein ID:NP_003416Link to BLAST:NP_003416.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003416.1 682 Q02386 682 100% 0 0

Chromosomal Locations for CCDS 12632.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 43913387 43915200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43918870 43918962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43919573 43919699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 43922171 43922185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2049 nt):
ATGACGAAGTCTAAGGAGGCAGTGACATTCAAGGACGTGGCTGTGGTCTTCTCTGAGGAGGAGCTGCAAC
TGCTGGACCTTGCCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAATGTGGTCTCAGT
GGGGCATCAGTCCACACCAGATGGCCTACCACAGTTAGAGAGAGAAGAAAAGCTGTGGATGATGAAGATG
GCAACCCAGAGAGATAACTCCTCAGGAGCCAAGAATCTAAAAGAGATGGAGACTCTTCAAGAAGTAGGAT
TAAGGTACCTGCCTCATGAAGAGCTTTTCTGCTCCCAGATCTGGCAACAGATTACAAGAGAGTTAATCAA
GTATCAAGATTCTGTGGTAAATATTCAAAGAACAGGCTGCCAGTTGGAAAAACGAGATGATTTGCACTAT
AAAGATGAGGGATTCAGTAATCAGAGTTCCCATCTTCAAGTTCACAGAGTCCACACTGGTGAAAAACCCT
ACAAAGGAGAACATTGTGTGAAAAGTTTCAGCTGGAGCTCTCATCTTCAAATTAACCAAAGGGCTCATGC
AGGAGAGAAGCCCTACAAATGTGAAAAATGTGATAATGCCTTCCGTCGGTTTTCAAGTCTTCAAGCCCAT
CAGAGAGTCCACAGTAGAGCAAAATCATACACAAATGATGCAAGTTACAGGAGTTTTAGTCAGAGGTCAC
ATCTTCCCCATCATCAGAGAGTTCCCACTGGAGAGAATCCATACAAATATGAAGAGTGTGGGAGGAATGT
TGGGAAAAGCTCACATTGTCAAGCTCCTCTGATAGTTCATACGGGAGAGAAACCCTATAAATGTGAGGAG
TGTGGGGTGGGCTTCAGTCAGAGATCATATCTTCAAGTTCATCTGAAAGTTCACACTGGAAAGAAACCAT
ATAAGTGTGAAGAGTGTGGGAAGAGCTTCAGTTGGCGTTCACGACTGCAGGCTCATGAGCGAATCCACAC
TGGCGAGAAACCATACAAATGCAATGCATGTGGCAAGAGCTTTAGTTACAGCTCACACCTTAATATTCAT
TGTAGAATCCACACAGGAGAGAAACCCTATAAGTGTGAGGAGTGTGGGAAAGGTTTCAGTGTGGGTTCAC
ACCTTCAGGCCCATCAGATAAGCCACACTGGAGAGAAGCCATACAAATGTGAGGAGTGTGGGAAAGGCTT
CTGCCGGGCCTCAAATCTGCTGGACCATCAAAGAGGCCATACTGGAGAGAAACCGTATCAGTGTGATGCA
TGTGGTAAGGGCTTCAGTCGTAGCTCAGATTTTAACATTCATTTTAGAGTCCATACAGGGGAAAAACCCT
ATAAATGTGAGGAGTGTGGCAAGGGCTTCAGCCAGGCCTCAAATCTTCTGGCCCATCAAAGAGGCCACAC
TGGAGAGAAACCCTACAAATGTGGTACATGTGGGAAGGGCTTCAGTCGGAGCTCAGATCTTAATGTACAC
TGTAGAATCCACACAGGAGAGAAACCCTATAAATGCGAGAGGTGTGGTAAGGCCTTCAGTCAGTTCTCCA
GCCTTCAGGTGCATCAGAGAGTTCACACTGGAGAGAAACCATATCAGTGTGCAGAGTGTGGGAAGGGCTT
CAGTGTAGGTTCACAGCTTCAAGCCCATCAGAGGTGCCACACTGGAGAGAAACCCTATCAATGTGAGGAG
TGTGGGAAGGGCTTCTGTCGGGCCTCCAATTTTCTGGCACATCGTGGAGTCCACACAGGAGAAAAACCAT
ACCGATGTGATGTGTGTGGTAAGCGCTTCAGACAGAGATCCTACCTTCAAGCCCACCAGAGGGTCCACAC
AGGAGAGAGACCATACAAATGTGAGGAATGTGGGAAAGTCTTCAGCTGGAGCTCATACCTTCAAGCCCAT
CAAAGAGTTCACACCGGAGAAAAACCATACAAATGTGAGGAGTGTGGGAAGGGCTTCAGTTGGAGCTCAA
GTCTTATCATTCATCAGCGAGTCCATGCTGATGATGAGGGTGACAAGGACTTTCCTTCATCAGAGGATTC
ACACAGGAAAACTCGATAA

Translation (682 aa):
MTKSKEAVTFKDVAVVFSEEELQLLDLAQRKLYRDVMLENFRNVVSVGHQSTPDGLPQLEREEKLWMMKM
ATQRDNSSGAKNLKEMETLQEVGLRYLPHEELFCSQIWQQITRELIKYQDSVVNIQRTGCQLEKRDDLHY
KDEGFSNQSSHLQVHRVHTGEKPYKGEHCVKSFSWSSHLQINQRAHAGEKPYKCEKCDNAFRRFSSLQAH
QRVHSRAKSYTNDASYRSFSQRSHLPHHQRVPTGENPYKYEECGRNVGKSSHCQAPLIVHTGEKPYKCEE
CGVGFSQRSYLQVHLKVHTGKKPYKCEECGKSFSWRSRLQAHERIHTGEKPYKCNACGKSFSYSSHLNIH
CRIHTGEKPYKCEECGKGFSVGSHLQAHQISHTGEKPYKCEECGKGFCRASNLLDHQRGHTGEKPYQCDA
CGKGFSRSSDFNIHFRVHTGEKPYKCEECGKGFSQASNLLAHQRGHTGEKPYKCGTCGKGFSRSSDLNVH
CRIHTGEKPYKCERCGKAFSQFSSLQVHQRVHTGEKPYQCAECGKGFSVGSQLQAHQRCHTGEKPYQCEE
CGKGFCRASNFLAHRGVHTGEKPYRCDVCGKRFRQRSYLQAHQRVHTGERPYKCEECGKVFSWSSYLQAH
QRVHTGEKPYKCEECGKGFSWSSSLIIHQRVHADDEGDKDFPSSEDSHRKTR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH