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Report for CCDS46715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46715.1 Public Homo sapiens 22 CHADL 24 110 108 CCDS HistoryNCBI Gene:150356Re-query CCDS DB by CCDS ID:46715.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46715.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216241.14 ENSP00000216241.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216241.14Link to Ensembl Protein Viewer:ENSP00000216241.9Re-query CCDS DB by Nucleotide ID:ENST00000216241Re-query CCDS DB by Protein ID:ENSP00000216241
Original member Current member NCBI NM_138481.2 NP_612490.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138481.2Link to Protein Sequence:NP_612490.1Re-query CCDS DB by Nucleotide ID:NM_138481Re-query CCDS DB by Protein ID:NP_612490Link to BLAST:NP_612490.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612490.1 762 Q6NUI6-1 762 100% 0 0

Chromosomal Locations for CCDS 46715.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 41229704 41229730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41235145 41235343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41236484 41236650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41237176 41238885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41239443 41239620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41240874 41240881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2289 nt):
ATGGAGGGGCCCCGGAGCTCCACCCATGTCCCCTTGGTGCTGCCGCTTCTTGTACTTCTGCTGCTGGCCC
CGGCTAGGCAGGCCGCCGCCCAGCGCTGCCCACAGGCCTGCATCTGTGACAACTCCAGGCGACACGTTGC
CTGCCGGTACCAGAACCTCACTGAGGTGCCAGACGCCATCCCTGAGCTGACCCAGCGGCTGGACCTGCAG
GGCAATTTGCTGAAGGTGATCCCCGCAGCCGCCTTCCAGGGCGTGCCTCACCTCACACACCTGGACCTGC
GCCACTGCGAGGTGGAGCTGGTGGCCGAGGGCGCCTTCCGTGGCCTGGGCCGCCTGCTCCTGCTCAACCT
GGCCTCCAACCACCTGCGTGAGCTGCCCCAGGAGGCGCTGGACGGGCTGGGCTCGTTGCGGCGGCTGGAG
CTGGAGGGGAACGCACTGGAGGAGCTGCGGCCGGGGACGTTCGGGGCACTGGGTGCGCTGGCCACGCTAA
ACCTGGCCCACAACGCCCTGGTTTACCTGCCCGCCATGGCCTTCCAGGGGCTACTGCGCGTCCGCTGGCT
GCGGCTGTCGCACAACGCGCTCAGCGTGCTGGCCCCCGAGGCCCTGGCTGGCCTGCCCGCCCTGAGACGG
CTCAGCCTACACCACAACGAGCTCCAGGCTCTGCCCGGGCCTGTCTTGTCCCAGGCCCGCGGCCTGGCCC
GTCTGGAGCTGGGCCACAACCCGCTCACCTACGCGGGCGAGGAGGACGGGCTGGCGCTGCCCGGCCTGCG
GGAGCTGCTGCTGGACGGCGGGGCCCTGCAGGCCCTGGGTCCCAGGGCCTTCGCACACTGTCCGCGCCTG
CACACCCTCGACCTCCGCGGGAACCAGCTAGACACCCTGCCCCCGCTGCAGGGCCCGGGCCAGCTGCGCC
GGCTGCGGCTGCAGGGGAATCCGCTGTGGTGCGGCTGCCAGGCGCGGCCCCTACTCGAGTGGCTGGCGCG
GGCGCGCGTGCGCTCGGACGGCGCGTGCCAGGGGCCGCGGCGCCTGCGGGGCGAGGCTCTGGACGCCCTG
CGGCCCTGGGACCTGCGCTGCCCTGGGGACGCGGCGCAGGAAGAGGAAGAGCTGGAAGAGCGGGCTGTGG
CCGGGCCCCGCGCCCCTCCGCGCGGCCCTCCGCGCGGCCCCGGGGAGGAGCGGGCAGTCGCGCCTTGCCC
TCGCGCCTGCGTGTGCGTCCCCGAGTCCCGGCACAGCAGCTGCGAGGGCTGCGGCCTGCAGGCGGTGCCC
CGCGGCTTCCCCAGCGACACCCAGCTCCTGGACCTGAGGCGGAACCACTTCCCCTCGGTGCCCCGAGCGG
CCTTCCCCGGCCTGGGCCACCTGGTGTCGCTGCACCTGCAGCACTGCGGCATCGCGGAGCTGGAAGCGGG
CGCCCTGGCCGGGCTGGGCCGCCTGATCTACCTGTACCTCTCCGACAACCAGCTCGCAGGCCTCAGCGCT
GCTGCCCTTGAAGGGGCTCCCCGCCTCGGCTACCTGTACCTAGAACGCAACCGTTTCCTGCAGGTGCCAG
GGGCTGCCCTGCGCGCCCTGCCCAGCCTCTTCTCCCTGCACCTGCAGGACAACGCTGTGGACCGCCTGGC
ACCTGGGGACCTGGGGAGAACACGGGCCTTGCGCTGGGTCTACCTGAGTGGAAACCGCATCACCGAAGTG
TCCCTTGGGGCGCTGGGCCCAGCTCGGGAGCTGGAGAAGCTGCACCTGGACAGGAATCAGCTGCGAGAGG
TGCCCACTGGGGCCTTGGAGGGGCTGCCTGCCCTCCTGGAGCTGCAGCTCTCGGGCAACCCACTCAGGGC
CTTGCGTGACGGAGCCTTCCAGCCTGTGGGCAGGTCGCTGCAGCACCTCTTCCTGAACAGCAGTGGCCTG
GAGCAGATTTGTCCTGGGGCCTTTTCAGGCCTGGGGCCCGGGCTCCAGAGCCTGCACCTGCAGAAGAACC
AGCTTCGGGCCCTGCCTGCCCTGCCCAGTCTCAGCCAGCTGGAGCTCATCGACCTCAGCAGCAATCCCTT
CCACTGTGACTGCCAGCTGCTTCCGCTGCACAGGTGGCTTACTGGGCTGAACCTGCGGGTGGGGGCCACC
TGCGCCACCCCTCCCAATGCCCGTGGCCAGAGGGTGAAGGCTGCAGCTGCTGTCTTTGAAGACTGCCCGG
GCTGGGCTGCCAGAAAGGCCAAGCGGACACCAGCCTCCAGGCCCAGTGCCAGGAGAACCCCCATCAAAGG
AAGACAGTGTGGAGCAGATAAGGTGGGGAAGGAGAAGGGTCGTCTCTGA

Translation (762 aa):
MEGPRSSTHVPLVLPLLVLLLLAPARQAAAQRCPQACICDNSRRHVACRYQNLTEVPDAIPELTQRLDLQ
GNLLKVIPAAAFQGVPHLTHLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLE
LEGNALEELRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRR
LSLHHNELQALPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRL
HTLDLRGNQLDTLPPLQGPGQLRRLRLQGNPLWCGCQARPLLEWLARARVRSDGACQGPRRLRGEALDAL
RPWDLRCPGDAAQEEEELEERAVAGPRAPPRGPPRGPGEERAVAPCPRACVCVPESRHSSCEGCGLQAVP
RGFPSDTQLLDLRRNHFPSVPRAAFPGLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSA
AALEGAPRLGYLYLERNRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEV
SLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLRALRDGAFQPVGRSLQHLFLNSSGL
EQICPGAFSGLGPGLQSLHLQKNQLRALPALPSLSQLELIDLSSNPFHCDCQLLPLHRWLTGLNLRVGAT
CATPPNARGQRVKAAAAVFEDCPGWAARKAKRTPASRPSARRTPIKGRQCGADKVGKEKGRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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