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Report for CCDS7648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7648.1 Public Homo sapiens 10 UROS 24 110 108 CCDS HistoryNCBI Gene:7390Re-query CCDS DB by CCDS ID:7648.1Re-query CCDS DB by GeneID:7390See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7648.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368786.5 ENSP00000357775.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368786.5Link to Ensembl Protein Viewer:ENSP00000357775.1Re-query CCDS DB by Nucleotide ID:ENST00000368786Re-query CCDS DB by Protein ID:ENSP00000357775
Original member Current member EBI ENST00000368797.10 ENSP00000357787.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368797.10Link to Ensembl Protein Viewer:ENSP00000357787.4Re-query CCDS DB by Nucleotide ID:ENST00000368797Re-query CCDS DB by Protein ID:ENSP00000357787
Original member Current member NCBI NM_000375.3 NP_000366.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000375.3Link to Protein Sequence:NP_000366.1Re-query CCDS DB by Nucleotide ID:NM_000375Re-query CCDS DB by Protein ID:NP_000366Link to BLAST:NP_000366.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000366.1 265 P10746 265 100% 0 0

Chromosomal Locations for CCDS 7648.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 125788868 125789005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125794880 125794978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125796103 125796188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125798065 125798145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125807413 125807487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125812214 125812288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125815034 125815130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125816177 125816260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 125816437 125816499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGAAGGTTCTTTTACTGAAGGATGCGAAGGAAGATGACTGTGGCCAGGATCCGTATATCAGGGAATTAG
GATTATATGGACTTGAAGCCACTTTGATCCCTGTTTTATCGTTTGAGTTTTTGTCTCTTCCCAGTTTCTC
TGAGAAGCTTTCTCATCCTGAAGATTACGGGGGACTCATTTTTACCAGCCCCAGAGCAGTGGAAGCAGCA
GAGTTATGTTTGGAGCAAAACAATAAAACTGAAGTCTGGGAAAGGTCTCTGAAAGAAAAATGGAATGCCA
AGTCAGTGTATGTGGTTGGAAATGCTACTGCTTCTCTAGTGAGTAAAATTGGCCTGGATACAGAAGGAGA
AACCTGTGGAAATGCAGAAAAGCTTGCAGAATATATTTGTTCCAGGGAGTCCTCAGCACTGCCTCTTCTA
TTTCCCTGTGGAAACCTCAAAAGAGAAATCCTGCCAAAAGCGCTCAAGGACAAAGGGATTGCCATGGAAA
GCATAACTGTGTATCAGACAGTTGCACACCCAGGAATCCAAGGGAACCTGAACAGCTACTATTCCCAGCA
GGGGGTTCCAGCCAGCATCACATTTTTTAGTCCCTCTGGCCTCACATACAGTCTCAAGCACATTCAGGAG
TTATCTGGTGACAATATCGATCAAATTAAGTTTGCAGCCATCGGCCCCACTACGGCTCGCGCGCTGGCCG
CCCAGGGCCTTCCTGTAAGCTGCACTGCAGAGAGCCCCACGCCACAAGCCCTGGCCACTGGCATCAGGAA
GGCTCTCCAGCCCCATGGCTGCTGCTGA

Translation (265 aa):
MKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFEFLSLPSFSEKLSHPEDYGGLIFTSPRAVEAA
ELCLEQNNKTEVWERSLKEKWNAKSVYVVGNATASLVSKIGLDTEGETCGNAEKLAEYICSRESSALPLL
FPCGNLKREILPKALKDKGIAMESITVYQTVAHPGIQGNLNSYYSQQGVPASITFFSPSGLTYSLKHIQE
LSGDNIDQIKFAAIGPTTARALAAQGLPVSCTAESPTPQALATGIRKALQPHGCC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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