NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS94061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94061.1 Public Homo sapiens 7 TMEM196 24 110 108 CCDS HistoryNCBI Gene:256130Re-query CCDS DB by CCDS ID:94061.1Re-query CCDS DB by GeneID:256130See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94061.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000422233.5 ENSP00000414247.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000422233.5Link to Ensembl Protein Viewer:ENSP00000414247.1Re-query CCDS DB by Nucleotide ID:ENST00000422233Re-query CCDS DB by Protein ID:ENSP00000414247
Original member Current member NCBI NM_001366627.1 NP_001353556.1 Accepted alive Link to Nucleotide Sequence:NM_001366627.1Link to Protein Sequence:NP_001353556.1Re-query CCDS DB by Nucleotide ID:NM_001366627Re-query CCDS DB by Protein ID:NP_001353556Link to BLAST:NP_001353556.1

Chromosomal Locations for CCDS 94061.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 19722128 19722134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19724280 19724353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 19725514 19725768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (336 nt):
ATGATCCTCTTTTCAGCCTGCTGTATCTGTGGACTTATTGGGGGCATCCTGAATTTTCAGTTCCTCCGGG
CAGTCACAAAGAAAACTTCCTCCCTATACCCACTGCACCTTGCCTCCATGTCTCTCGCGTGCATTGGGAT
CGGGGGCTGCACTCTCTCTTCCTGGCTCACTTGTCGACTAGCCAGTTATGAACAGAGGAGGATGTTCTCA
GAAAGGGAGCATTCCCTGCATCACTCTCATGAAATGGCTGAGAAAAGATTGAGGGCTATTGAAATAACCG
ACTTGCCCAGCTGCCCGGTGGTGCCCCCGACACCAGAGTTACCTACAAGGAAATAA

Translation (111 aa):
MILFSACCICGLIGGILNFQFLRAVTKKTSSLYPLHLASMSLACIGIGGCTLSSWLTCRLASYEQRRMFS
EREHSLHHSHEMAEKRLRAIEITDLPSCPVVPPTPELPTRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH