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Report for CCDS51321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51321.1 Public Mus musculus 4 Tmem222 23 108 98 CCDS HistoryNCBI Gene:52174Re-query CCDS DB by CCDS ID:51321.1Re-query CCDS DB by GeneID:52174See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51321.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105907.8 ENSMUSP00000101527.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105907.8Link to Ensembl Protein Viewer:ENSMUSP00000101527.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105907Re-query CCDS DB by Protein ID:ENSMUSP00000101527
Original member Current member NCBI NM_025667.3 NP_079943.2 Accepted alive Link to Nucleotide Sequence:NM_025667.3Link to Protein Sequence:NP_079943.2Re-query CCDS DB by Nucleotide ID:NM_025667Re-query CCDS DB by Protein ID:NP_079943Link to BLAST:NP_079943.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079943.2 208 Q8BVA2 208 100% 0 0

Chromosomal Locations for CCDS 51321.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 133266834 133266921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133268196 133268326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133268409 133268505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133269778 133269809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133270963 133271047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133277531 133277724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGGCGGAAGCGGAAGGGAGTTCTCCGCTTCTGTTACAGCCGCCGCCGCCCCCTCCTCGGATGGCGGAAG
TAGAAACGCCGACGGGGGCCGAGACGGACATGAAGCAGTACCACGGGTCCGGTGGCGTTGTCATGGACGT
GGAGCGGAGCCGCTTCCCCTACTGCGTGGTGTGGACACCCATCCCGGTGCTCACGTGGTTTTTCCCCATC
ATTGGCCACATGGGCATCTGCACATCTGCAGGGGTCATTCGTGACTTCGCTGGCCCCTATTTTGTTTCGG
AAGACAACATGGCCTTCGGAAAGCCTGCCAAGTTCTGGAAATTGGACCCCGGACAGGTGTATGCGAGTGG
GCCCAATGCATGGGACACGGCTGTGCACGATGCCTCCGAAGAGTATAAGCACCGAATGCACAATCTCTGC
TGTGACAACTGCCACTCCCACGTGGCTTTAGCCCTGAACCTGATGCGTTACAACAACAGCACCAACTGGA
ACATGGTGACGCTCTGCTGCTTCTGCCTCATTTATGGGAAGTATGTCAGTGTTGGAGCCTTTGTGAAGAC
CTGGCTGCCCTTTGTCCTTCTCCTCGGCATTATCCTGACCGTCAGTCTCGTCTTCAATCTGCGGTGA

Translation (208 aa):
MAEAEGSSPLLLQPPPPPPRMAEVETPTGAETDMKQYHGSGGVVMDVERSRFPYCVVWTPIPVLTWFFPI
IGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPAKFWKLDPGQVYASGPNAWDTAVHDASEEYKHRMHNLC
CDNCHSHVALALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVGAFVKTWLPFVLLLGIILTVSLVFNLR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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