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Report for CCDS92761.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92761.1 Public Homo sapiens 2 BCL11A 24 110 108 CCDS HistoryNCBI Gene:53335Re-query CCDS DB by CCDS ID:92761.1Re-query CCDS DB by GeneID:53335See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92761.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335712.11 ENSP00000338774.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335712.11Link to Ensembl Protein Viewer:ENSP00000338774.7Re-query CCDS DB by Nucleotide ID:ENST00000335712Re-query CCDS DB by Protein ID:ENSP00000338774
Original member Current member NCBI NM_001365609.1 NP_001352538.1 Accepted alive Link to Nucleotide Sequence:NM_001365609.1Link to Protein Sequence:NP_001352538.1Re-query CCDS DB by Nucleotide ID:NM_001365609Re-query CCDS DB by Protein ID:NP_001352538Link to BLAST:NP_001352538.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352538.1 801 Q9H165-6 801 100% 0 0

Chromosomal Locations for CCDS 92761.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 60460404 60462424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60545971 60546300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 60553216 60553270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2406 nt):
ATGTCTCGCCGCAAGCAAGGCAAACCCCAGCACTTAAGCAAACGGGAATTCTCGCCCGAGCCTCTTGAAG
CCATTCTTACAGATGATGAACCAGACCACGGCCCGTTGGGAGCTCCAGAAGGGGATCATGACCTCCTCAC
CTGTGGGCAGTGCCAGATGAACTTCCCATTGGGGGACATTCTTATTTTTATCGAGCACAAACGGAAACAA
TGCAATGGCAGCCTCTGCTTAGAAAAAGCTGTGGATAAGCCACCTTCCCCTTCACCAATCGAGATGAAAA
AAGCATCCAATCCCGTGGAGGTTGGCATCCAGGTCACGCCAGAGGATGACGATTGTTTATCAACGTCATC
TAGAGGAATTTGCCCCAAACAGGAACACATAGCAGGTAAAGATGAGCCCAGCAGCTACACATGTACAACT
TGCAAACAGCCATTCACCAGTGCATGGTTTCTCTTGCAACACGCACAGAACACTCATGGATTAAGAATCT
ACTTAGAAAGCGAACACGGAAGTCCCCTGACCCCGCGGGTTGGTATCCCTTCAGGACTAGGTGCAGAATG
TCCTTCCCAGCCACCTCTCCATGGGATTCATATTGCAGACAATAACCCCTTTAACCTGCTAAGAATACCA
GGATCAGTATCGAGAGAGGCTTCCGGCCTGGCAGAAGGGCGCTTTCCACCCACTCCCCCCCTGTTTAGTC
CACCACCGAGACATCACTTGGACCCCCACCGCATAGAGCGCCTGGGGGCGGAAGAGATGGCCCTGGCCAC
CCATCACCCGAGTGCCTTTGACAGGGTGCTGCGGTTGAATCCAATGGCTATGGAGCCTCCCGCCATGGAT
TTCTCTAGGAGACTTAGAGAGCTGGCAGGGAACACGTCTAGCCCACCGCTGTCCCCAGGCCGGCCCAGCC
CTATGCAAAGGTTACTGCAACCATTCCAGCCAGGTAGCAAGCCGCCCTTCCTGGCGACGCCCCCCCTCCC
TCCTCTGCAATCCGCCCCTCCTCCCTCCCAGCCCCCGGTCAAGTCCAAGTCATGCGAGTTCTGCGGCAAG
ACGTTCAAATTTCAGAGCAACCTGGTGGTGCACCGGCGCAGCCACACGGGCGAGAAGCCCTACAAGTGCA
ACCTGTGCGACCACGCGTGCACCCAGGCCAGCAAGCTGAAGCGCCACATGAAGACGCACATGCACAAATC
GTCCCCCATGACGGTCAAGTCCGACGACGGTCTCTCCACCGCCAGCTCCCCGGAACCCGGCACCAGCGAC
TTGGTGGGCAGCGCCAGCAGCGCGCTCAAGTCCGTGGTGGCCAAGTTCAAGAGCGAGAACGACCCCAACC
TGATCCCGGAGAACGGGGACGAGGAGGAAGAGGAGGACGACGAGGAAGAGGAAGAAGAGGAGGAAGAGGA
GGAGGAGGAGCTGACGGAGAGCGAGAGGGTGGACTACGGCTTCGGGCTGAGCCTGGAGGCGGCGCGCCAC
CACGAGAACAGCTCGCGGGGCGCGGTCGTGGGCGTGGGCGACGAGAGCCGCGCCCTGCCCGACGTCATGC
AGGGCATGGTGCTCAGCTCCATGCAGCACTTCAGCGAGGCCTTCCACCAGGTCCTGGGCGAGAAGCATAA
GCGCGGCCACCTGGCCGAGGCCGAGGGCCACAGGGACACTTGCGACGAAGACTCGGTGGCCGGCGAGTCG
GACCGCATAGACGATGGCACTGTTAATGGCCGCGGCTGCTCCCCGGGCGAGTCGGCCTCGGGGGGCCTGT
CCAAAAAGCTGCTGCTGGGCAGCCCCAGCTCGCTGAGCCCCTTCTCTAAGCGCATCAAGCTCGAGAAGGA
GTTCGACCTGCCCCCGGCCGCGATGCCCAACACGGAGAACGTGTACTCGCAGTGGCTCGCCGGCTACGCG
GCCTCCAGGCAGCTCAAAGATCCCTTCCTTAGCTTCGGAGACTCCAGACAATCGCCTTTTGCCTCCTCGT
CGGAGCACTCCTCGGAGAACGGGAGTTTGCGCTTCTCCACACCGCCCGGGGAGCTGGACGGAGGGATCTC
GGGGCGCAGCGGCACGGGAAGTGGAGGGAGCACGCCCCATATTAGTGGTCCGGGCCCGGGCAGGCCCAGC
TCAAAAGAGGGCAGACGCAGCGACACTTGTGAGTACTGTGGGAAAGTCTTCAAGAACTGTAGCAATCTCA
CTGTCCACAGGAGAAGCCACACGGGCGAAAGGCCTTATAAATGCGAGCTGTGCAACTATGCCTGTGCCCA
GAGTAGCAAGCTCACCAGGCACATGAAAACGCATGGCCAGGTGGGGAAGGACGTTTACAAATGTGAAATT
TGTAAGATGCCTTTTAGCGTGTACAGTACCCTGGAGAAACACATGAAAAAATGGCACAGTGATCGAGTGT
TGAATAATGATATAAAAACTGAATAG

Translation (801 aa):
MSRRKQGKPQHLSKREFSPEPLEAILTDDEPDHGPLGAPEGDHDLLTCGQCQMNFPLGDILIFIEHKRKQ
CNGSLCLEKAVDKPPSPSPIEMKKASNPVEVGIQVTPEDDDCLSTSSRGICPKQEHIAGKDEPSSYTCTT
CKQPFTSAWFLLQHAQNTHGLRIYLESEHGSPLTPRVGIPSGLGAECPSQPPLHGIHIADNNPFNLLRIP
GSVSREASGLAEGRFPPTPPLFSPPPRHHLDPHRIERLGAEEMALATHHPSAFDRVLRLNPMAMEPPAMD
FSRRLRELAGNTSSPPLSPGRPSPMQRLLQPFQPGSKPPFLATPPLPPLQSAPPPSQPPVKSKSCEFCGK
TFKFQSNLVVHRRSHTGEKPYKCNLCDHACTQASKLKRHMKTHMHKSSPMTVKSDDGLSTASSPEPGTSD
LVGSASSALKSVVAKFKSENDPNLIPENGDEEEEEDDEEEEEEEEEEEEELTESERVDYGFGLSLEAARH
HENSSRGAVVGVGDESRALPDVMQGMVLSSMQHFSEAFHQVLGEKHKRGHLAEAEGHRDTCDEDSVAGES
DRIDDGTVNGRGCSPGESASGGLSKKLLLGSPSSLSPFSKRIKLEKEFDLPPAAMPNTENVYSQWLAGYA
ASRQLKDPFLSFGDSRQSPFASSSEHSSENGSLRFSTPPGELDGGISGRSGTGSGGSTPHISGPGPGRPS
SKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQVGKDVYKCEI
CKMPFSVYSTLEKHMKKWHSDRVLNNDIKTE


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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