NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45365.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45365.1 Public Homo sapiens 16 PRR35 24 110 108 CCDS HistoryNCBI Gene:146325Re-query CCDS DB by CCDS ID:45365.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45365.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409413.4 ENSP00000386499.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409413.4Link to Ensembl Protein Viewer:ENSP00000386499.3Re-query CCDS DB by Nucleotide ID:ENST00000409413Re-query CCDS DB by Protein ID:ENSP00000386499
Original member Current member NCBI NM_145270.3 NP_660313.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145270.3Link to Protein Sequence:NP_660313.1Re-query CCDS DB by Nucleotide ID:NM_145270Re-query CCDS DB by Protein ID:NP_660313Link to BLAST:NP_660313.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660313.1 571 P0CG20 571 100% 0 0

Chromosomal Locations for CCDS 45365.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 563295 564376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 564674 565307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGTCGCGGGAGGCGGGCTCATGCCGCGTGGGCACAGGGGCGAGGGCGCGGTCTCGGAAGCCCAAGAAGC
CACACTACATCCCGCGGCCCTGGGGCAAACCCTACAACTACAAATGCTTCCAGTGCCCCTTCACCTGCCT
GGAGAAGTCACACCTCTACAACCACATGAAGTACAGCCTCTGCAAGGACTCCCTGTCCCTGCTGCTAGAC
TCCCCAGACTGGGCGTGCCGCCGTGGCTCCACCACGCCTAGGCCCCACGCACCCACCCCAGACCGCCCTG
GGGAGTCCGACCCCGGCAGGCAACCCCAGGGAGCACGGCCCACAGGTGCTGCCCCCGCGCCTGACCTCGT
GGTCGCCGACATCCACTCCCTGCACTGTGGCGGAGGCCCCAAGTCCAGGGCCAAGGGGTCCCCAGGGCCA
CCACCCCCTGTGGCTAGGGCCACCCGGAAGGGTCCCGGCCCCAGTGGGCTCCTGCCTGAGTCGTGGAAGC
CGGGGATGGGAGGGGACCCAAGGGGCGTGGGTGCGGGGGACATGGCCTCAGCAGGCCCTGAGGGCAGCGT
CCCCTGCTATCCCCCGCCTGCCCCAGGGGAGTTCCCTGAGGCCCACAGCCTCCACCTGTCTCTGCTGGGC
GTCAACTACCCGCTCAGCCCCGGCCTCTTCTCCTACTTGGGGCCCTCACTGGCCGCTGCAGCCCATGTGC
CCTTCCTGGCCTCGGCCAGCCCCCTGCTGCCCCCGGCCACGGCCTTCCCAGCCGTGCAGCCCCCTCAGCG
CCCCACCCCGGCCCCCCGCCTGTACTACCCGCTGCTTCTGGAGCACACTCTGGGGCTGCCAGCAGGCAAA
GCTGCCCTTGCCAAGGCCCCTGTCTCCCCCAGGAGCCCCTCTGGGACTCCGGCTCCTGGCCTGCTGAAGG
TGCCAGTTCCAGGGCTGGGGCCCTGGCCCCGAGTCACCCCCAGGGACCCAGGGCAGGAGGGGGAGCTGGA
GCGGGCAGCCCAGAGTGACCCCAGGAGGAGGCTGTCCCTGGGAAGCAGGCTGGAGCTTCCGAAGGCATCC
CCCAGCCTGACAAGGTTCTGTTCCCGGAGCAGCCTGCCCACCGGCTCCTCTGTGATGCTGTGGCCTGAGG
ACGGGGATCCAGGCGGCCCTGAGACCCCCGGCCCTGAGGGCCCCCTCCCCCTGCAGCCACGGGGCCCAGT
GCCAGGAAGCCCGGAGCATGTGGGCGAGGACCTGACCCGAGCCCTCGGTGACTACGCCAGGGTGGAGCAG
CGCCTGGGACAGTTGGGGCCCGCGGGGGGCCTGGCCCCGAGACCCCTGCGGGAGCAGCTGGGCAAGATCC
GCCTGGAGCTGCTCACCATTCACCAGGCGCTGGAGCAGGCCGTGAGGCCGCCAGACGCACCCCTCGACCT
CTCTGTGAAACGTGCGCCCGCCAAGGGGCCCCAGGCTCTTGGAGAGGCGTGGGGGCGGCCCGAGCTGGGT
CCCGTGTTGACCGGGGGCACCCCCGAGCCACCCGGCATGCTGGGCCCTGCAGCGCCCCAACCCTTCTCTG
GCCACACCACCAAGTGTGAGGCCGACTCCAGCGTCCCACCCCCAGGGCTCCCCCTCGCAGCCCCAGATGA
CCCTGTCATTCCTGGCAGTGGCTGGGGCACCTGTGTTGCGACGAGGAGTTCCCAGACCCCTGAGGCTGTC
TGTGGCCTGCAGAGCCCCCAGGGCGCCGAGGTCTGA

Translation (571 aa):
MSREAGSCRVGTGARARSRKPKKPHYIPRPWGKPYNYKCFQCPFTCLEKSHLYNHMKYSLCKDSLSLLLD
SPDWACRRGSTTPRPHAPTPDRPGESDPGRQPQGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPGP
PPPVARATRKGPGPSGLLPESWKPGMGGDPRGVGAGDMASAGPEGSVPCYPPPAPGEFPEAHSLHLSLLG
VNYPLSPGLFSYLGPSLAAAAHVPFLASASPLLPPATAFPAVQPPQRPTPAPRLYYPLLLEHTLGLPAGK
AALAKAPVSPRSPSGTPAPGLLKVPVPGLGPWPRVTPRDPGQEGELERAAQSDPRRRLSLGSRLELPKAS
PSLTRFCSRSSLPTGSSVMLWPEDGDPGGPETPGPEGPLPLQPRGPVPGSPEHVGEDLTRALGDYARVEQ
RLGQLGPAGGLAPRPLREQLGKIRLELLTIHQALEQAVRPPDAPLDLSVKRAPAKGPQALGEAWGRPELG
PVLTGGTPEPPGMLGPAAPQPFSGHTTKCEADSSVPPPGLPLAAPDDPVIPGSGWGTCVATRSSQTPEAV
CGLQSPQGAEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH