NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45441.1 Public Homo sapiens 16 VWA3A 24 110 108 CCDS HistoryNCBI Gene:146177Re-query CCDS DB by CCDS ID:45441.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45441.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389398.10 ENSP00000374049.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000389398.10Link to Ensembl Protein Viewer:ENSP00000374049.5Re-query CCDS DB by Nucleotide ID:ENST00000389398Re-query CCDS DB by Protein ID:ENSP00000374049
Original member Current member NCBI NM_173615.5 NP_775886.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173615.5Link to Protein Sequence:NP_775886.3Re-query CCDS DB by Nucleotide ID:NM_173615Re-query CCDS DB by Protein ID:NP_775886Link to BLAST:NP_775886.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775886.3 1184 A6NCI4-1 1184 100% 0 0

Chromosomal Locations for CCDS 45441.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 22092638 22092651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22096859 22096945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22097572 22097695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22100194 22100318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22100416 22100493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22103475 22103529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22109482 22109580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22110888 22110994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22115347 22115472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22116759 22116867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22117111 22117176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22118902 22119027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22120968 22121103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22121514 22121617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22123085 22123165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22123613 22123707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22126178 22126297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22131205 22131279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22131585 22131729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22132900 22133095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22134368 22134438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22138360 22138512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22140154 22140244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22141582 22141692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22142668 22142765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22144247 22144384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22146236 22146344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22148162 22148306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22149787 22149931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22150695 22150846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22152511 22152634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22155567 22155664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22155851 22155902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3555 nt):
ATGAAGAAATACAGGAAAATAAGCATTGGGTGTTTTGCAATGGCTACACAAACTAGTCATGTCTTCCATG
GTCAAGAAAATATGTTTCTGGAAAACCATTGCATTAGGAGAAACACTGGCAGAGATTCAAAGAAGCCACT
AAAGCAGAAGAATATGAATGGACTTGGGCAAAATTCGGACAATGGATTATTGGTTACACATGTTAACCAG
ACACAGGACTTACTGAGGCTGCAGGGGAGTGAGACCCAGTCTTCAGATTGGGAGGACTCTGAAGACTGGC
TTTCGGCTCACAGTTTAAAATGTCAGAAACTCACCTTGGCTGACCTGATAAGCCAGGGCACAGAAGTGCT
GGAGGAGGGCACCAATGTCGTGCAGAAAATATGTTTCTCCACCCAGATCATCCGCCATTTTGAGTCAAAG
CTTTCTGACACTATTGAAGTCTATCAAGAGAGAATTCAGTGGCTCACAGAAAACAGCAAGAAGGCATTTG
GCCTCATCAAAGGGGCCAGAGTCAGCATCCTCATAGATGTGTCAGCCATCAGCAGTGGCCCTCAGAAAGA
AGAGTTCCAAAAGGACCTCATGAGCCTCATCGATGAGCAGCTGAGCCACAAGGAGAAGCTGTTTGTCCTG
TCCTTTGGCACCAATGCCGGGTCCCTCTGGCCAGACCCCATGGAAGTCAGCGCCTCCACCCTCCAGGAAC
TTAAGCTCTGGGTAAAGACGCTGCAGCCTGATGGAGGCAGCAACCTGCTACAAGCTCTGAAGAAGATCTT
CACTCTCAAGGGACTGGATTCCCTGGTGGCCATCATGAGAAGCTGCCCAGATCAGCCTTCTGAAATCCTG
TCTGACTACATCCAGCAGTCCACCATGGGAAGAGACCTCATCATCCACTTCATCACCTACAGATGCGATG
ATCAGATGCCCCCTGCTGTCCTGAAGAACCTTGCAGAAGCTGTTAGGGGCTACTACCACTGCTACAGCCC
AAAGATGGAGCACTACACCAGCCGGGACATGGATGAGCTCCTGGCAGAAATTCAGAAGGCCCAGAGCCTC
CTCAGCCACGTGCAAGCCCTGCAGCACAGCAGCCCCTGTGAGGCGCTCACCTGCACCATGGAGGAGATTT
CCACAGAGATTACAAATGGGCCACTCATAAGCCTCTTGCCTAAACCCCCAAAGCATGACGCTCCTCTCAC
CATTGAGTTTCCAAACTTGGACAAGACTTCTGCAGAGTGGCTTAAGGTCAATGGTCTGAAAGCCAAGAAA
TTAAGTCTATATCAGGTCCTGGCACCCAATGCATTCTCTCCTGTGGAGGAATTTGTACCTATTCTCCAGA
AAACAGTATCATCGACCATCCATGAGAAGGCAATGATACAATTTGAATGGCACGACGGGACAGTGAAGAA
CATTCATGTGGACCCACCCTTCCTCTATAAGTACCAGCAACAGCTCAGCAGAGCTATGCGGATGTATGAG
AGGCGGATTGAGTGGCTCTCCCTGGCCAGCAGAAGAATCTGGGGCACAGTCTGTGAAAAAAGGGTGGTTG
TACTGCTCGATATCTCTGCGACCAATTCCATGTACATTATTCATATCCAGCACTCCCTGCGGCTGCTGCT
GGAGGAGCAGTTATCCAACAAGGACTGTTTCAACCTCATCGCGTTTGGAAGCACAATTGAAAGCTGGAGG
CCTGAGATGGTTCCCGTGAGTCACAACAATTTACAAAGTGCCTGGCGGTGGGCCCTGAACCTGCGGTGTC
GGGGCAGCAGGAACGTTCTCAGCGCCCTGCGGAAGGCTGTGGAAGTAGACTTCAAGGACAAAGACAAACA
CCAATCGCAGGGAATCTACCTCTTCACTGGGGGCATCCCCGACCAGGACATGCCTACACTCAGTGCCTAC
ATGGCTGAGGCCTGTGGCGGCTGCGACCTCCAGCTGAACGTGTGTCTCTTCTACGTGGGCGAGCCAAAGA
TGGACACCACACCCCCTGCCCGCTATGCCAGTCACACTGACACAGCCGCCGCCTACAAGGAGGTCACCCG
GGCTGCAGGTGGCCGCTTCCACTGGTTTGGAGACACAGGCATTTATGAGAGCGATGACATCAACTCCATC
ATGTCTGAGATGGAAAAGGCTCTCAACTACTCCCAAAAGTGTGCCTTCCTCATGGCCTCCCTGAAGAACC
ATTCAGGAAAAGTACTGGGAAGTTCAGCCCTCCCGAAAGAAAAACCAAAGACACTTCAGCTAAGAAGTCA
GCCCAAGAAGCTCTGCCCTCCCAGGCCCACCGTCCCCCTGGGGGCCAGAATGAGCATTAAAGATGACCCT
GACAGAGAGAAGAGCCCCCCGCTGAAATCTCTGAAATGGCGTCCACTCAGTAGCAGAGTTGGCATCTCAC
CAGCTGCGGCCCAGCCAACGAAAGAAGGGATGATGGAACTGAGGAGGAAGACCAAGTCAAGGGAAGCAGA
GACATCTCTTTTACTGTTCTACACAGAGAAAGGGAATGACGTGGGCTCAGTGTACAAGAAGTACCCTCAA
GGAAGGGGCTTGAGAAGGACTAGCTCTTCTATTGACTTACCCAGAAAGGATACAGTTTGCTCAAGCCAAG
AGTGGGTGGCAAAATATGGGCTCAAAAAATTGAAGCTGGAGATTTCCAGATGCATGGGTCCCAACTGCAC
TCATCAAAAGTCAGGACAGAGGTCAGCATCCGCCAAACACTGCAGCATCTTCCCCAGCGTTGAGATCCAT
GGAGTGGTGAGACACATCCAGTGGACGCCCAGGGAGATGGAGGTGTACATCAGGCACTTGGAGAAGGTGT
TAAGGCGCTATGTCCAGAGGCTGCAGTGGCTGCTGTCCGGGAGCCGCCGACTGTTTGGCACCGTTTTGGA
GAGCAAAGTATGCATATTGCTGGACACGTCAGGGTCCATGGGCCCCTACCTGCAGCAGGTGAAGACAGAG
CTGGTTTTGCTGATTTGGGAACAGCTGCGGAAGTGCTGTGACAGTTTTAACCTGCTCAGCTTTGCAGAGA
GCTTTCAGTCATGGCAGGACACGCTGGTGGAGACCACAGATGCAGCGTGTCATGAGGCTATGCAATGGGT
GACCCACCTGCAAGCTCAGGGCAGCACCTCCATCTTGCAAGCATTGCTGAAAGCTTTCAGTTTCCATGAT
CTGGAAGGATTGTACCTCCTGACCGACGGAAAGCCAGACACAAGCTGCAGCCTTGTCCTAAATGAAGTCC
AAAAACTCAGGGAGAAAAGAGATGTGAAAGTGCACACCATTTCCTTGAACTGCTCAGACAGAGCGGCGGT
TGAGTTCCTGAGAAAGCTGGCTTCCTTCACCGGCGGACGCTATCACTGCCCTGTGGGTGAGGACACACTC
TCCAAAATTCACAGCCTGCTGACCAAAGGCTTCATCAATGAAAAGGATCCCACATTGCCACCATTTGAAG
GAGATGATTTAAGGATCCTGGCCCAGGAGATCACCAAGGCCAGAAGCTTCCTCTGGCAGGCCCAATCCTT
CAGATCCCAACTCCAGAAGAAAAATGATGCAGAACCAAAGGTCACTCTTTCCTAG

Translation (1184 aa):
MKKYRKISIGCFAMATQTSHVFHGQENMFLENHCIRRNTGRDSKKPLKQKNMNGLGQNSDNGLLVTHVNQ
TQDLLRLQGSETQSSDWEDSEDWLSAHSLKCQKLTLADLISQGTEVLEEGTNVVQKICFSTQIIRHFESK
LSDTIEVYQERIQWLTENSKKAFGLIKGARVSILIDVSAISSGPQKEEFQKDLMSLIDEQLSHKEKLFVL
SFGTNAGSLWPDPMEVSASTLQELKLWVKTLQPDGGSNLLQALKKIFTLKGLDSLVAIMRSCPDQPSEIL
SDYIQQSTMGRDLIIHFITYRCDDQMPPAVLKNLAEAVRGYYHCYSPKMEHYTSRDMDELLAEIQKAQSL
LSHVQALQHSSPCEALTCTMEEISTEITNGPLISLLPKPPKHDAPLTIEFPNLDKTSAEWLKVNGLKAKK
LSLYQVLAPNAFSPVEEFVPILQKTVSSTIHEKAMIQFEWHDGTVKNIHVDPPFLYKYQQQLSRAMRMYE
RRIEWLSLASRRIWGTVCEKRVVVLLDISATNSMYIIHIQHSLRLLLEEQLSNKDCFNLIAFGSTIESWR
PEMVPVSHNNLQSAWRWALNLRCRGSRNVLSALRKAVEVDFKDKDKHQSQGIYLFTGGIPDQDMPTLSAY
MAEACGGCDLQLNVCLFYVGEPKMDTTPPARYASHTDTAAAYKEVTRAAGGRFHWFGDTGIYESDDINSI
MSEMEKALNYSQKCAFLMASLKNHSGKVLGSSALPKEKPKTLQLRSQPKKLCPPRPTVPLGARMSIKDDP
DREKSPPLKSLKWRPLSSRVGISPAAAQPTKEGMMELRRKTKSREAETSLLLFYTEKGNDVGSVYKKYPQ
GRGLRRTSSSIDLPRKDTVCSSQEWVAKYGLKKLKLEISRCMGPNCTHQKSGQRSASAKHCSIFPSVEIH
GVVRHIQWTPREMEVYIRHLEKVLRRYVQRLQWLLSGSRRLFGTVLESKVCILLDTSGSMGPYLQQVKTE
LVLLIWEQLRKCCDSFNLLSFAESFQSWQDTLVETTDAACHEAMQWVTHLQAQGSTSILQALLKAFSFHD
LEGLYLLTDGKPDTSCSLVLNEVQKLREKRDVKVHTISLNCSDRAAVEFLRKLASFTGGRYHCPVGEDTL
SKIHSLLTKGFINEKDPTLPPFEGDDLRILAQEITKARSFLWQAQSFRSQLQKKNDAEPKVTLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH