NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS20988.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20988.1 Public Mus musculus 7 Dmac2 23 108 98 CCDS HistoryNCBI Gene:66349Re-query CCDS DB by CCDS ID:20988.1Re-query CCDS DB by GeneID:66349See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20988.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000085953.4 ENSMUSP00000083115.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000085953.4Link to Ensembl Protein Viewer:ENSMUSP00000083115.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000085953Re-query CCDS DB by Protein ID:ENSMUSP00000083115
Original member Current member NCBI NM_025504.4 NP_079780.2 Accepted alive Link to Nucleotide Sequence:NM_025504.4Link to Protein Sequence:NP_079780.2Re-query CCDS DB by Nucleotide ID:NM_025504Re-query CCDS DB by Protein ID:NP_079780Link to BLAST:NP_079780.2

Chromosomal Locations for CCDS 20988.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 25620450 25620464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25620896 25621092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25622344 25622424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25623799 25623938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25624027 25624189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 25624715 25624892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (774 nt):
ATGCACACTATGCACGTCCTGCACCTGGGCGCCCGAGAATGGAATGGCAGAGCCAGGCGCATCCATGGCA
TGAGTGAGTTGGTGACCCCGGACAGCAGTCGGGAGAAGAAAAGAACGCTGTTGCAGTTCCTCTCAGATCA
TTTCCAGGACATCCAGACTCTGAGAGAGTACTTGCTCCAGAAACAGATCTCAAAAGTCAACAGGGAGAAT
CGATCCTTCACTAACATCCAGGAGAAATATGGCCCGTATGTTGCAGGTGCTGTCTTCATCCTGAAGCAGG
GAGGCGCAGTGAAGTTTCAGGACAAGGAGGAATGGATCCGGCCAAATAACCGTAGCCATTTCCTCGCCGA
GATTCAGAAGTTCCAGAATGTGCCTGTGGAGGCTGTGGATGCCAGTGGCTGTGCCATCAACTACCAGGGC
CTGAGTAACCTCTTGCCCCTGAAGGAGCTGCGGTCCCTGTCCCTGCAGCGCTGCCCCAACCTGGACGACT
GGTGCCTCAGCCGCCTCTACCTATTGGCTGGCTCACTGCAGGAGCTCTCGCTGGCTGGCTGCCCCAGAAT
CTCAGAACGGGGCCTTGCCTGCCTCCACCACCTCCAGAACCTCCGCAGGCTGGACATCTCAGACCTCCCT
GCCGTGTCCCACCCAGGTCTCACTCAGATCCTGGTGGAAGAGATGTTGCCCCACTGTGAGGTCCTTGGAG
CTGACTGGGCCCAGAATCTCAAGCTGGAACCAGACAAGCAGCCTCCAGACACATCTACCCCCCTCTCTTC
CTAG

Translation (257 aa):
MHTMHVLHLGAREWNGRARRIHGMSELVTPDSSREKKRTLLQFLSDHFQDIQTLREYLLQKQISKVNREN
RSFTNIQEKYGPYVAGAVFILKQGGAVKFQDKEEWIRPNNRSHFLAEIQKFQNVPVEAVDASGCAINYQG
LSNLLPLKELRSLSLQRCPNLDDWCLSRLYLLAGSLQELSLAGCPRISERGLACLHHLQNLRRLDISDLP
AVSHPGLTQILVEEMLPHCEVLGADWAQNLKLEPDKQPPDTSTPLSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH