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Report for CCDS21593.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21593.1 Public Mus musculus 7 Hbb-y 23 108 98 CCDS HistoryNCBI Gene:15135Re-query CCDS DB by CCDS ID:21593.1Re-query CCDS DB by GeneID:15135See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21593.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033229.4 ENSMUSP00000033229.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033229.4Link to Ensembl Protein Viewer:ENSMUSP00000033229.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000033229Re-query CCDS DB by Protein ID:ENSMUSP00000033229
Original member Current member NCBI NM_008221.4 NP_032247.1 Accepted alive Link to Nucleotide Sequence:NM_008221.4Link to Protein Sequence:NP_032247.1Re-query CCDS DB by Nucleotide ID:NM_008221Re-query CCDS DB by Protein ID:NP_032247Link to BLAST:NP_032247.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032247.1 147 P02104 147 99.3197% 0 1

Chromosomal Locations for CCDS 21593.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 103851874 103852002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103852748 103852970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 103853061 103853152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGTGAACTTTACTGCTGAGGAAAAGACCCTCATCAATGGCCTGTGGAGTAAGGTCAATGTTGAAGAGG
TTGGTGGTGAAGCCTTGGGAAGGCTTCTTGTTGTGTACCCATGGACCCATAGATTTTTTGACAGCTTTGG
GAACTTGTCCTCTGCTTCTGCCATAATGGGCAACCCAAGGGTCAAAGCCCATGGCAAGAAGGTGCTGACT
GCTTTTGGAGAGTCCATTAAGAATCTAGACAACCTCAAGTCTGCCTTGGCCAAGCTCAGTGAACTGCACT
GTGACAAGCTACATGTGGATCCTGAGAACTTCAAACTCTTGGGTAATGTGCTGGTGATTGTTTTGGCTAG
TCACTTCGGCAATGAATTCACAGCTGAGATGCAGGCTGCCTGGCAGAAGCTGGTGGCTGGGGTGGCCACT
GCGCTGTCCCACAAGTACCACTGA

Translation (147 aa):
MVNFTAEEKTLINGLWSKVNVEEVGGEALGRLLVVYPWTHRFFDSFGNLSSASAIMGNPRVKAHGKKVLT
AFGESIKNLDNLKSALAKLSELHCDKLHVDPENFKLLGNVLVIVLASHFGNEFTAEMQAAWQKLVAGVAT
ALSHKYH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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