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Report for CCDS5670.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5670.1 Public Homo sapiens 7 ZNF655 24 110 108 CCDS HistoryNCBI Gene:79027Re-query CCDS DB by CCDS ID:5670.1Re-query CCDS DB by GeneID:79027See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5670.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320583.9 ENSP00000322363.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320583.9Link to Ensembl Protein Viewer:ENSP00000322363.5Re-query CCDS DB by Nucleotide ID:ENST00000320583Re-query CCDS DB by Protein ID:ENSP00000322363
Original member Current member NCBI NM_001085367.1 NP_001078836.1 Accepted alive Link to Nucleotide Sequence:NM_001085367.1Link to Protein Sequence:NP_001078836.1Re-query CCDS DB by Nucleotide ID:NM_001085367Re-query CCDS DB by Protein ID:NP_001078836Link to BLAST:NP_001078836.1
Original member Current member NCBI NM_024061.4 NP_076966.1 Accepted alive Link to Nucleotide Sequence:NM_024061.4Link to Protein Sequence:NP_076966.1Re-query CCDS DB by Nucleotide ID:NM_024061Re-query CCDS DB by Protein ID:NP_076966Link to BLAST:NP_076966.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001078836.1 181 Q8N720-2 181 100% 0 0
NP_076966.1 181 Q8N720-2 181 100% 0 0

Chromosomal Locations for CCDS 5670.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99560560 99560695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99561888 99561973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99562368 99562494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99563863 99564059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGGAGGAAATACCAGCCCAGGAAGCAGCAGGGTCACCAAGGGTCCAGTTTCAGTCTTTGGAGACCCAGT
CTGAGTGTCTGTCCCCAGAGCCTCAGTTTGTGCAGGACACCGACATGGAACAGGGACTCACTGGGGCTCC
ACCTGTTCCTCAGGTGCCTGCTCTTCCCCGTGAGGGAAGCCCAGGAGACCAGGCAGCTGCGCTCTTGACA
GCCAGGTACCAGGAGTTTGTGACATTCGAGGATGTGGCTGTGCACCTTACTCGAGAGGAATGGGGATACC
TGGACCCTGTTCAGAGGGACCTCTACAGAGAAGTGATGTTAGAGAATTATGGGAACGTGGTCTCACTGGG
CATACTTCTCCGCCTTCCCACCACCCGGATTCATAGTGTGAATTCCTGCCCGGCCCTGAGTCATACCCAG
GCAAGTGCTTTCTCTGGAGAAACACTTGCCGTCCTTACAGCAGGAATCTCCAAGAGATGGCCCAAGTATC
GGCTTCCCATCGATATTGCTCGTCCCTGCTCGGAAACTCCTTTTCCACGATTGTGA

Translation (181 aa):
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGSPGDQAAALLT
ARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLPTTRIHSVNSCPALSHTQ
ASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSETPFPRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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